Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SNORA36.1-201ENST00000363424 132 ntBASIC1.49□□□□□ -2.17
CLCN1P35523 RNU6-990P-201ENST00000364385 104 ntBASIC1.49□□□□□ -2.17
CLCN1P35523 RNA5SP147-201ENST00000516493 109 ntBASIC1.49□□□□□ -2.17
CLCN1P35523 RNA5SP94-201ENST00000516917 108 ntBASIC1.49□□□□□ -2.17
CLCN1P35523 SNORA2.1-201ENST00000363089 137 ntBASIC1.48□□□□□ -2.17
CLCN1P35523 RNU6-668P-201ENST00000364180 107 ntBASIC1.48□□□□□ -2.17
CLCN1P35523 RNU6-939P-201ENST00000384634 107 ntBASIC1.47□□□□□ -2.17
CLCN1P35523 RNA5SP480-201ENST00000516840 109 ntBASIC1.47□□□□□ -2.17
CLCN1P35523 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.46□□□□□ -2.18
CLCN1P35523 AC018659.1-201ENST00000551083 169 ntBASIC1.46□□□□□ -2.18
CLCN1P35523 AL353765.1-201ENST00000605514 183 ntBASIC1.46□□□□□ -2.18
CLCN1P35523 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.46□□□□□ -2.18
CLCN1P35523 AC006210.1-201ENST00000424882 111 ntBASIC1.45□□□□□ -2.18
CLCN1P35523 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLCN1P35523 RNU6-645P-201ENST00000364649 106 ntBASIC1.44□□□□□ -2.18
CLCN1P35523 MIR7107-201ENST00000611489 80 ntBASIC1.44□□□□□ -2.18
CLCN1P35523 MIR1285-1-201ENST00000408593 84 ntBASIC1.43□□□□□ -2.18
CLCN1P35523 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.43□□□□□ -2.18
CLCN1P35523 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
CLCN1P35523 AL109933.3-201ENST00000619095 188 ntBASIC1.43□□□□□ -2.18
CLCN1P35523 SNORA36.2-201ENST00000384004 127 ntBASIC1.42□□□□□ -2.18
CLCN1P35523 SNORD110-201ENST00000408189 75 ntBASIC1.41□□□□□ -2.18
CLCN1P35523 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
CLCN1P35523 MIR4661-201ENST00000582720 75 ntBASIC1.41□□□□□ -2.18
CLCN1P35523 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
CLCN1P35523 Y_RNA.407-201ENST00000383986 113 ntBASIC1.4□□□□□ -2.19
CLCN1P35523 SNORA40.17-201ENST00000517256 115 ntBASIC1.4□□□□□ -2.19
CLCN1P35523 MIR4473-201ENST00000583731 91 ntBASIC1.4□□□□□ -2.19
CLCN1P35523 AC103706.3-201ENST00000636297 85 ntBASIC1.4□□□□□ -2.19
CLCN1P35523 MIR4511-201ENST00000582784 87 ntBASIC1.39□□□□□ -2.19
CLCN1P35523 RNU6-1187P-201ENST00000364771 110 ntBASIC1.38□□□□□ -2.19
CLCN1P35523 SNORD114-22-201ENST00000365423 72 ntBASIC1.38□□□□□ -2.19
CLCN1P35523 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
CLCN1P35523 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
CLCN1P35523 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
CLCN1P35523 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
CLCN1P35523 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLCN1P35523 RNY1P8-201ENST00000383970 114 ntBASIC1.37□□□□□ -2.19
CLCN1P35523 Y_RNA.540-201ENST00000384638 111 ntBASIC1.37□□□□□ -2.19
CLCN1P35523 MIR9-2-201ENST00000384838 87 ntBASIC1.37□□□□□ -2.19
CLCN1P35523 Y_RNA.250-201ENST00000364542 110 ntBASIC1.35□□□□□ -2.19
CLCN1P35523 snoU13.13-201ENST00000458842 104 ntBASIC1.35□□□□□ -2.19
CLCN1P35523 MIR6515-201ENST00000619843 57 ntBASIC1.35□□□□□ -2.19
CLCN1P35523 MIR6739-201ENST00000622461 75 ntBASIC1.35□□□□□ -2.19
CLCN1P35523 RNU6-1162P-201ENST00000384443 104 ntBASIC1.34□□□□□ -2.19
CLCN1P35523 MIR652-201ENST00000385278 98 ntBASIC1.34□□□□□ -2.19
CLCN1P35523 SCARNA17.3-201ENST00000516381 125 ntBASIC1.34□□□□□ -2.19
CLCN1P35523 RNU6-656P-201ENST00000516785 107 ntBASIC1.34□□□□□ -2.19
CLCN1P35523 MIR4752-201ENST00000579672 72 ntBASIC1.34□□□□□ -2.19
CLCN1P35523 SNORA70.25-201ENST00000612741 95 ntBASIC1.34□□□□□ -2.19
CLCN1P35523 SNORD114-26-201ENST00000363543 72 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 RNA5SP325-201ENST00000363756 130 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 RNA5SP517-201ENST00000364724 117 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 MIR140-201ENST00000385282 100 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 AC021146.9-201ENST00000512503 156 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 MIR548AE1-201ENST00000583292 70 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 AC103810.9-201ENST00000606688 112 ntBASIC1.33□□□□□ -2.2
CLCN1P35523 MIR6779-201ENST00000617283 64 ntBASIC1.32□□□□□ -2.2
CLCN1P35523 AC092634.7-201ENST00000621022 103 ntBASIC1.31□□□□□ -2.2
CLCN1P35523 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLCN1P35523 Y_RNA.375-201ENST00000365625 101 ntBASIC1.3□□□□□ -2.2
CLCN1P35523 RNU6-542P-201ENST00000516405 103 ntBASIC1.3□□□□□ -2.2
CLCN1P35523 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
CLCN1P35523 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CLCN1P35523 MIR608-201ENST00000384820 100 ntBASIC1.29□□□□□ -2.2
CLCN1P35523 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLCN1P35523 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CLCN1P35523 OR2A41P-201ENST00000473586 105 ntBASIC1.28□□□□□ -2.2
CLCN1P35523 SNORA25.18-201ENST00000607153 114 ntBASIC1.28□□□□□ -2.2
CLCN1P35523 AC022709.1-201ENST00000615967 87 ntBASIC1.28□□□□□ -2.2
CLCN1P35523 uc_338.10-201ENST00000621872 182 ntBASIC1.28□□□□□ -2.2
CLCN1P35523 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CLCN1P35523 MIR548C-201ENST00000384815 97 ntBASIC1.27□□□□□ -2.21
CLCN1P35523 MIR521-2-201ENST00000384818 87 ntBASIC1.27□□□□□ -2.21
CLCN1P35523 AC069271.1-201ENST00000445577 156 ntBASIC1.27□□□□□ -2.21
CLCN1P35523 RNU6-1089P-201ENST00000516473 104 ntBASIC1.27□□□□□ -2.21
CLCN1P35523 SNORA63.6-201ENST00000364921 119 ntBASIC1.26□□□□□ -2.21
CLCN1P35523 ACA64.5-201ENST00000516207 127 ntBASIC1.26□□□□□ -2.21
CLCN1P35523 AL157398.1-201ENST00000452981 186 ntBASIC1.25□□□□□ -2.21
CLCN1P35523 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.25□□□□□ -2.21
CLCN1P35523 RNA5SP215-201ENST00000363440 122 ntBASIC1.24□□□□□ -2.21
CLCN1P35523 SNORA15B-2-201ENST00000384058 135 ntBASIC1.24□□□□□ -2.21
CLCN1P35523 SNORA15B-1-201ENST00000384334 135 ntBASIC1.24□□□□□ -2.21
CLCN1P35523 MIR598-201ENST00000384868 97 ntBASIC1.24□□□□□ -2.21
CLCN1P35523 RNU6-1223P-201ENST00000517124 104 ntBASIC1.24□□□□□ -2.21
CLCN1P35523 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 MIR582-201ENST00000365731 98 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 RNA5SP299-201ENST00000391203 116 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 AC110620.1-201ENST00000416042 228 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 RPS29P1-201ENST00000465274 159 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 MIR5706-201ENST00000579841 80 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 PVT1_3.1-201ENST00000620853 95 ntBASIC1.23□□□□□ -2.21
CLCN1P35523 SNORA40.8-201ENST00000411034 126 ntBASIC1.22□□□□□ -2.21
CLCN1P35523 SNORD71-201ENST00000411292 86 ntBASIC1.22□□□□□ -2.21
CLCN1P35523 HMGN2P22-201ENST00000427588 175 ntBASIC1.22□□□□□ -2.21
CLCN1P35523 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
CLCN1P35523 MIR548E-201ENST00000408287 88 ntBASIC1.21□□□□□ -2.22
CLCN1P35523 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.21□□□□□ -2.22
CLCN1P35523 MIR548V-201ENST00000584165 80 ntBASIC1.21□□□□□ -2.22
CLCN1P35523 MIR151B-201ENST00000584249 96 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 443.3 ms