Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIR3613-201ENST00000579844 87 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 YWHAEP3-201ENST00000582767 121 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 AC104996.3-201ENST00000590718 94 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 AL035470.1-201ENST00000622571 220 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 MIR382-201ENST00000637119 76 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 SNORD75.2-201ENST00000408784 58 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 RNU7-24P-201ENST00000458867 62 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 RNU6-327P-201ENST00000516270 127 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 AC090617.8-201ENST00000623339 167 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 U6.96-201ENST00000636425 70 ntBASIC-1.23□□□□□ -2.61
SLC6A1P30531 RNY3P2-201ENST00000362918 102 ntBASIC-1.24□□□□□ -2.61
SLC6A1P30531 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.24□□□□□ -2.61
SLC6A1P30531 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.24□□□□□ -2.61
SLC6A1P30531 RNU6-208P-201ENST00000362431 107 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 SNORD114-17-201ENST00000364699 75 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 MIR569-201ENST00000385228 96 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 MIR4464-201ENST00000580818 92 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 MIR4439-201ENST00000583746 80 ntBASIC-1.25□□□□□ -2.61
SLC6A1P30531 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 RNU6-574P-201ENST00000384265 107 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 RNU6-644P-201ENST00000391155 98 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 RNU6-394P-201ENST00000410735 107 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 SNORD4B-201ENST00000459083 72 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 AC103810.7-201ENST00000607821 91 ntBASIC-1.26□□□□□ -2.61
SLC6A1P30531 RNU6-196P-201ENST00000384315 107 ntBASIC-1.27□□□□□ -2.61
SLC6A1P30531 MIR548A1-201ENST00000385041 97 ntBASIC-1.27□□□□□ -2.61
SLC6A1P30531 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.27□□□□□ -2.61
SLC6A1P30531 AL353803.5-201ENST00000599815 141 ntBASIC-1.27□□□□□ -2.61
SLC6A1P30531 RNU6-200P-201ENST00000364743 107 ntBASIC-1.28□□□□□ -2.61
SLC6A1P30531 RNU6-24P-201ENST00000384440 107 ntBASIC-1.28□□□□□ -2.61
SLC6A1P30531 RNA5SP292-201ENST00000390974 118 ntBASIC-1.28□□□□□ -2.61
SLC6A1P30531 SNORD90-201ENST00000391145 111 ntBASIC-1.28□□□□□ -2.61
SLC6A1P30531 MTND3P2-201ENST00000438452 342 ntBASIC-1.28□□□□□ -2.61
SLC6A1P30531 MIR4679-2-201ENST00000578358 77 ntBASIC-1.28□□□□□ -2.61
SLC6A1P30531 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 SNORD45B-201ENST00000364617 72 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 RNU6-804P-201ENST00000384286 107 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 RNA5SP272-201ENST00000516095 111 ntBASIC-1.29□□□□□ -2.62
SLC6A1P30531 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 RNU6-813P-201ENST00000384691 107 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 snoU13.17-201ENST00000458802 104 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 RNU6-772P-201ENST00000516042 105 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 RNU6-62P-201ENST00000516526 102 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 MIR6888-201ENST00000621977 67 ntBASIC-1.3□□□□□ -2.62
SLC6A1P30531 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 RNU6-382P-201ENST00000365181 106 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 MIR548Z-201ENST00000584743 97 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 AL445584.3-201ENST00000617173 78 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 MIR4320-201ENST00000636981 65 ntBASIC-1.31□□□□□ -2.62
SLC6A1P30531 RNU6-519P-201ENST00000410590 108 ntBASIC-1.32□□□□□ -2.62
SLC6A1P30531 snoU83B.1-201ENST00000517136 88 ntBASIC-1.32□□□□□ -2.62
SLC6A1P30531 MIR3144-201ENST00000579460 79 ntBASIC-1.32□□□□□ -2.62
SLC6A1P30531 MIR4306-201ENST00000583390 91 ntBASIC-1.32□□□□□ -2.62
SLC6A1P30531 AC004792.1-201ENST00000614523 137 ntBASIC-1.32□□□□□ -2.62
SLC6A1P30531 RNA5SP192-201ENST00000364404 120 ntBASIC-1.33□□□□□ -2.62
SLC6A1P30531 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
SLC6A1P30531 SNORA18.5-201ENST00000516616 101 ntBASIC-1.33□□□□□ -2.62
SLC6A1P30531 MIR3165-201ENST00000579874 75 ntBASIC-1.33□□□□□ -2.62
SLC6A1P30531 AC006254.2-201ENST00000603259 279 ntBASIC-1.33□□□□□ -2.62
SLC6A1P30531 SNORA33.1-201ENST00000364957 130 ntBASIC-1.34□□□□□ -2.62
SLC6A1P30531 RNU6-260P-201ENST00000384092 107 ntBASIC-1.34□□□□□ -2.62
SLC6A1P30531 RNU6-426P-201ENST00000516464 97 ntBASIC-1.34□□□□□ -2.62
SLC6A1P30531 RNA5SP147-201ENST00000516493 109 ntBASIC-1.34□□□□□ -2.62
SLC6A1P30531 AL157777.2-201ENST00000258070 137 ntBASIC-1.35□□□□□ -2.63
SLC6A1P30531 RNU6-379P-201ENST00000363813 104 ntBASIC-1.35□□□□□ -2.63
SLC6A1P30531 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.35□□□□□ -2.63
SLC6A1P30531 MTATP6P29-201ENST00000415057 132 ntBASIC-1.35□□□□□ -2.63
SLC6A1P30531 MIR5009-201ENST00000578736 100 ntBASIC-1.35□□□□□ -2.63
SLC6A1P30531 RNU6-824P-201ENST00000363724 104 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MIR203A-201ENST00000384836 110 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MIR1255B2-201ENST00000408618 67 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MIR548I1-201ENST00000408810 149 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MIR1468-201ENST00000410600 86 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MIR4777-201ENST00000583710 86 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MIR4773-1-201ENST00000637203 78 ntBASIC-1.36□□□□□ -2.63
SLC6A1P30531 MTND4LP9-201ENST00000427694 174 ntBASIC-1.37□□□□□ -2.63
SLC6A1P30531 MTND5P41-201ENST00000517498 206 ntBASIC-1.37□□□□□ -2.63
SLC6A1P30531 MIR3115-201ENST00000577915 68 ntBASIC-1.37□□□□□ -2.63
SLC6A1P30531 MIR6509-201ENST00000614603 85 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms