Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
VARSP26640 SNORD113-4-201ENST00000364802 75 ntBASIC1.58□□□□□ -2.16
VARSP26640 MIR517B-201ENST00000385102 67 ntBASIC1.58□□□□□ -2.16
VARSP26640 Y_RNA.118-201ENST00000363300 101 ntBASIC1.57□□□□□ -2.16
VARSP26640 RNU6-936P-201ENST00000384005 107 ntBASIC1.57□□□□□ -2.16
VARSP26640 SNORD124-201ENST00000459577 104 ntBASIC1.57□□□□□ -2.16
VARSP26640 AL162376.1-201ENST00000624117 175 ntBASIC1.57□□□□□ -2.16
VARSP26640 MIR26B-201ENST00000362251 77 ntBASIC1.56□□□□□ -2.16
VARSP26640 SNORA25.8-201ENST00000364831 128 ntBASIC1.56□□□□□ -2.16
VARSP26640 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
VARSP26640 MIR758-201ENST00000390227 88 ntBASIC1.56□□□□□ -2.16
VARSP26640 SNORD113-2-201ENST00000391082 72 ntBASIC1.56□□□□□ -2.16
VARSP26640 RNU6-808P-201ENST00000391233 108 ntBASIC1.56□□□□□ -2.16
VARSP26640 snoU13.18-201ENST00000459483 104 ntBASIC1.56□□□□□ -2.16
VARSP26640 U2.7-201ENST00000619197 100 ntBASIC1.56□□□□□ -2.16
VARSP26640 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.56□□□□□ -2.16
VARSP26640 SNORA33.1-201ENST00000364957 130 ntBASIC1.55□□□□□ -2.16
VARSP26640 SNORA15B-2-201ENST00000384058 135 ntBASIC1.55□□□□□ -2.16
VARSP26640 SNORA15B-1-201ENST00000384334 135 ntBASIC1.55□□□□□ -2.16
VARSP26640 MIR652-201ENST00000385278 98 ntBASIC1.55□□□□□ -2.16
VARSP26640 RNA5SP227-201ENST00000516184 113 ntBASIC1.55□□□□□ -2.16
VARSP26640 RNU7-174P-201ENST00000516248 59 ntBASIC1.55□□□□□ -2.16
VARSP26640 RNU6-698P-201ENST00000363523 107 ntBASIC1.54□□□□□ -2.16
VARSP26640 RNU6-34P-201ENST00000364874 107 ntBASIC1.54□□□□□ -2.16
VARSP26640 Y_RNA.407-201ENST00000383986 113 ntBASIC1.54□□□□□ -2.16
VARSP26640 MIR19B1-201ENST00000384829 87 ntBASIC1.54□□□□□ -2.16
VARSP26640 Y_RNA.633-201ENST00000459107 95 ntBASIC1.54□□□□□ -2.16
VARSP26640 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
VARSP26640 SCARNA17.3-201ENST00000516381 125 ntBASIC1.54□□□□□ -2.16
VARSP26640 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
VARSP26640 uc_338.10-201ENST00000621872 182 ntBASIC1.54□□□□□ -2.16
VARSP26640 Y_RNA.125-201ENST00000363371 111 ntBASIC1.53□□□□□ -2.16
VARSP26640 RNU6-392P-201ENST00000364926 101 ntBASIC1.53□□□□□ -2.16
VARSP26640 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
VARSP26640 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
VARSP26640 MIR4473-201ENST00000583731 91 ntBASIC1.53□□□□□ -2.16
VARSP26640 MIR6828-201ENST00000636181 60 ntBASIC1.53□□□□□ -2.16
VARSP26640 SNORA63.6-201ENST00000364921 119 ntBASIC1.52□□□□□ -2.17
VARSP26640 MIR200A-201ENST00000384875 90 ntBASIC1.52□□□□□ -2.17
VARSP26640 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
VARSP26640 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
VARSP26640 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
VARSP26640 AC025627.3-201ENST00000582078 182 ntBASIC1.52□□□□□ -2.17
VARSP26640 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.52□□□□□ -2.17
VARSP26640 U4.4-201ENST00000620626 117 ntBASIC1.52□□□□□ -2.17
VARSP26640 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VARSP26640 AC006210.1-201ENST00000424882 111 ntBASIC1.51□□□□□ -2.17
VARSP26640 MIR548AE1-201ENST00000583292 70 ntBASIC1.51□□□□□ -2.17
VARSP26640 MIR6504-201ENST00000613520 61 ntBASIC1.51□□□□□ -2.17
VARSP26640 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
VARSP26640 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
VARSP26640 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
VARSP26640 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
VARSP26640 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
VARSP26640 SNORD110-201ENST00000408189 75 ntBASIC1.49□□□□□ -2.17
VARSP26640 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
VARSP26640 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.49□□□□□ -2.17
VARSP26640 AC011195.1-201ENST00000578177 177 ntBASIC1.49□□□□□ -2.17
VARSP26640 MIR18A-201ENST00000362310 71 ntBASIC1.48□□□□□ -2.17
VARSP26640 RNU6-1312P-201ENST00000362425 108 ntBASIC1.48□□□□□ -2.17
VARSP26640 SNORA36.1-201ENST00000363424 132 ntBASIC1.48□□□□□ -2.17
VARSP26640 MIR582-201ENST00000365731 98 ntBASIC1.48□□□□□ -2.17
VARSP26640 RNU6-1184P-201ENST00000384588 108 ntBASIC1.48□□□□□ -2.17
VARSP26640 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
VARSP26640 RNA5SP268-201ENST00000516828 124 ntBASIC1.48□□□□□ -2.17
VARSP26640 Y_RNA.224-201ENST00000364308 111 ntBASIC1.47□□□□□ -2.17
VARSP26640 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
VARSP26640 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
VARSP26640 MIR548E-201ENST00000408287 88 ntBASIC1.47□□□□□ -2.17
VARSP26640 SNORD99-201ENST00000408612 74 ntBASIC1.47□□□□□ -2.17
VARSP26640 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
VARSP26640 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
VARSP26640 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
VARSP26640 MIR1276-201ENST00000408707 83 ntBASIC1.45□□□□□ -2.18
VARSP26640 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
VARSP26640 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
VARSP26640 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
VARSP26640 SNORD114-24-201ENST00000365029 72 ntBASIC1.44□□□□□ -2.18
VARSP26640 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VARSP26640 RNU6-939P-201ENST00000384634 107 ntBASIC1.44□□□□□ -2.18
VARSP26640 RNA5SP255-201ENST00000516370 107 ntBASIC1.44□□□□□ -2.18
VARSP26640 Y_RNA.246-201ENST00000364495 108 ntBASIC1.43□□□□□ -2.18
VARSP26640 RNU6-42P-201ENST00000384165 107 ntBASIC1.43□□□□□ -2.18
VARSP26640 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
VARSP26640 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
VARSP26640 MIR7107-201ENST00000611489 80 ntBASIC1.43□□□□□ -2.18
VARSP26640 Y_RNA.325-201ENST00000365171 122 ntBASIC1.42□□□□□ -2.18
VARSP26640 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
VARSP26640 RNA5SP220-201ENST00000516298 104 ntBASIC1.42□□□□□ -2.18
VARSP26640 RNA5SP94-201ENST00000516917 108 ntBASIC1.42□□□□□ -2.18
VARSP26640 CYP3A54P-201ENST00000566950 75 ntBASIC1.42□□□□□ -2.18
VARSP26640 U6.96-201ENST00000636425 70 ntBASIC1.42□□□□□ -2.18
VARSP26640 RNU6-520P-201ENST00000384717 104 ntBASIC1.41□□□□□ -2.18
VARSP26640 RNA5SP404-201ENST00000517118 132 ntBASIC1.41□□□□□ -2.18
VARSP26640 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
VARSP26640 SNORA9.1-201ENST00000362412 131 ntBASIC1.4□□□□□ -2.19
VARSP26640 SNORA41B-201ENST00000384785 128 ntBASIC1.4□□□□□ -2.19
VARSP26640 MIR4752-201ENST00000579672 72 ntBASIC1.4□□□□□ -2.19
VARSP26640 MIR548AD-201ENST00000584780 82 ntBASIC1.4□□□□□ -2.19
VARSP26640 SNORA70.25-201ENST00000612741 95 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms