Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR573-201ENST00000384964 99 ntBASIC1.4□□□□□ -2.19
NID1P14543 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
NID1P14543 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
NID1P14543 AC021146.9-201ENST00000512503 156 ntBASIC1.4□□□□□ -2.19
NID1P14543 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
NID1P14543 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
NID1P14543 MIR7978-201ENST00000636158 59 ntBASIC1.4□□□□□ -2.19
NID1P14543 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
NID1P14543 RNU6-808P-201ENST00000391233 108 ntBASIC1.39□□□□□ -2.19
NID1P14543 snoU13.18-201ENST00000459483 104 ntBASIC1.39□□□□□ -2.19
NID1P14543 MIR3612-201ENST00000579753 87 ntBASIC1.39□□□□□ -2.19
NID1P14543 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
NID1P14543 MIR517B-201ENST00000385102 67 ntBASIC1.38□□□□□ -2.19
NID1P14543 SNORD113-2-201ENST00000391082 72 ntBASIC1.38□□□□□ -2.19
NID1P14543 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
NID1P14543 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
NID1P14543 SNORA15B-2-201ENST00000384058 135 ntBASIC1.37□□□□□ -2.19
NID1P14543 SNORA15B-1-201ENST00000384334 135 ntBASIC1.37□□□□□ -2.19
NID1P14543 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
NID1P14543 uc_338.10-201ENST00000621872 182 ntBASIC1.37□□□□□ -2.19
NID1P14543 MIR1276-201ENST00000408707 83 ntBASIC1.36□□□□□ -2.19
NID1P14543 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
NID1P14543 AL162376.1-201ENST00000624117 175 ntBASIC1.36□□□□□ -2.19
NID1P14543 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.36□□□□□ -2.19
NID1P14543 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
NID1P14543 RNU6-698P-201ENST00000363523 107 ntBASIC1.35□□□□□ -2.19
NID1P14543 RNU6-34P-201ENST00000364874 107 ntBASIC1.35□□□□□ -2.19
NID1P14543 RNU6-936P-201ENST00000384005 107 ntBASIC1.35□□□□□ -2.19
NID1P14543 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
NID1P14543 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
NID1P14543 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
NID1P14543 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.35□□□□□ -2.19
NID1P14543 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
NID1P14543 SNORD113-4-201ENST00000364802 75 ntBASIC1.34□□□□□ -2.19
NID1P14543 Y_RNA.407-201ENST00000383986 113 ntBASIC1.34□□□□□ -2.19
NID1P14543 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
NID1P14543 RNA5SP227-201ENST00000516184 113 ntBASIC1.34□□□□□ -2.19
NID1P14543 RNU7-174P-201ENST00000516248 59 ntBASIC1.34□□□□□ -2.19
NID1P14543 SCARNA17.3-201ENST00000516381 125 ntBASIC1.34□□□□□ -2.19
NID1P14543 AC025627.3-201ENST00000582078 182 ntBASIC1.34□□□□□ -2.19
NID1P14543 U2.7-201ENST00000619197 100 ntBASIC1.34□□□□□ -2.19
NID1P14543 MIR6828-201ENST00000636181 60 ntBASIC1.34□□□□□ -2.19
NID1P14543 SNORA63.6-201ENST00000364921 119 ntBASIC1.33□□□□□ -2.2
NID1P14543 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
NID1P14543 Y_RNA.633-201ENST00000459107 95 ntBASIC1.33□□□□□ -2.2
NID1P14543 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
NID1P14543 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NID1P14543 Y_RNA.125-201ENST00000363371 111 ntBASIC1.32□□□□□ -2.2
NID1P14543 RNU6-392P-201ENST00000364926 101 ntBASIC1.32□□□□□ -2.2
NID1P14543 SNORA33.1-201ENST00000364957 130 ntBASIC1.32□□□□□ -2.2
NID1P14543 SNORD124-201ENST00000459577 104 ntBASIC1.32□□□□□ -2.2
NID1P14543 MIR6504-201ENST00000613520 61 ntBASIC1.32□□□□□ -2.2
NID1P14543 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
NID1P14543 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
NID1P14543 MIR652-201ENST00000385278 98 ntBASIC1.31□□□□□ -2.2
NID1P14543 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
NID1P14543 AC006210.1-201ENST00000424882 111 ntBASIC1.31□□□□□ -2.2
NID1P14543 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
NID1P14543 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
NID1P14543 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.31□□□□□ -2.2
NID1P14543 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
NID1P14543 RNU6-1184P-201ENST00000384588 108 ntBASIC1.3□□□□□ -2.2
NID1P14543 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.3□□□□□ -2.2
NID1P14543 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
NID1P14543 U4.4-201ENST00000620626 117 ntBASIC1.3□□□□□ -2.2
NID1P14543 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
NID1P14543 MIR4473-201ENST00000583731 91 ntBASIC1.29□□□□□ -2.2
NID1P14543 SNORD110-201ENST00000408189 75 ntBASIC1.28□□□□□ -2.2
NID1P14543 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
NID1P14543 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
NID1P14543 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
NID1P14543 RNU6-520P-201ENST00000384717 104 ntBASIC1.27□□□□□ -2.21
NID1P14543 RNA5SP268-201ENST00000516828 124 ntBASIC1.27□□□□□ -2.21
NID1P14543 MIR548AE1-201ENST00000583292 70 ntBASIC1.27□□□□□ -2.21
NID1P14543 MIR18A-201ENST00000362310 71 ntBASIC1.26□□□□□ -2.21
NID1P14543 RNU6-1312P-201ENST00000362425 108 ntBASIC1.26□□□□□ -2.21
NID1P14543 RNU4-45P-201ENST00000365469 141 ntBASIC1.26□□□□□ -2.21
NID1P14543 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NID1P14543 RNU6-42P-201ENST00000384165 107 ntBASIC1.26□□□□□ -2.21
NID1P14543 MIR548E-201ENST00000408287 88 ntBASIC1.26□□□□□ -2.21
NID1P14543 AC011195.1-201ENST00000578177 177 ntBASIC1.26□□□□□ -2.21
NID1P14543 SNORA36.1-201ENST00000363424 132 ntBASIC1.25□□□□□ -2.21
NID1P14543 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
NID1P14543 MIR582-201ENST00000365731 98 ntBASIC1.25□□□□□ -2.21
NID1P14543 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
NID1P14543 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
NID1P14543 Y_RNA.246-201ENST00000364495 108 ntBASIC1.24□□□□□ -2.21
NID1P14543 RNA5SP255-201ENST00000516370 107 ntBASIC1.24□□□□□ -2.21
NID1P14543 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
NID1P14543 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
NID1P14543 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
NID1P14543 SNORD114-27-201ENST00000363766 70 ntBASIC1.23□□□□□ -2.21
NID1P14543 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
NID1P14543 SNORD99-201ENST00000408612 74 ntBASIC1.23□□□□□ -2.21
NID1P14543 RNA5SP220-201ENST00000516298 104 ntBASIC1.23□□□□□ -2.21
NID1P14543 U6.96-201ENST00000636425 70 ntBASIC1.23□□□□□ -2.21
NID1P14543 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
NID1P14543 RNA5SP480-201ENST00000516840 109 ntBASIC1.22□□□□□ -2.21
NID1P14543 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
NID1P14543 MIR7107-201ENST00000611489 80 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms