Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC062037.1-201ENST00000605302 128 ntBASIC-5.94□□□□□ -3.36
TOP2AP11388 RNU6-1296P-201ENST00000383879 107 ntBASIC-5.94□□□□□ -3.36
TOP2AP11388 MIR3163-201ENST00000581592 73 ntBASIC-5.94□□□□□ -3.36
TOP2AP11388 MIR548AH-201ENST00000637109 76 ntBASIC-5.94□□□□□ -3.36
TOP2AP11388 MIR616-201ENST00000385293 97 ntBASIC-5.95□□□□□ -3.36
TOP2AP11388 MT-TI-201ENST00000387365 69 ntBASIC-5.95□□□□□ -3.36
TOP2AP11388 RNU6-644P-201ENST00000391155 98 ntBASIC-5.96□□□□□ -3.36
TOP2AP11388 RNU6-1272P-201ENST00000362776 107 ntBASIC-5.97□□□□□ -3.37
TOP2AP11388 Y_RNA.155-201ENST00000363632 101 ntBASIC-5.97□□□□□ -3.37
TOP2AP11388 ZNF519P2-201ENST00000557032 169 ntBASIC-5.97□□□□□ -3.37
TOP2AP11388 RNU6-1252P-201ENST00000363054 104 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 SNORA63-201ENST00000363450 132 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 SNORD58A-201ENST00000383875 65 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 Y_RNA.418-201ENST00000384029 102 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 MIR656-201ENST00000385224 78 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 AL450471.1-201ENST00000447509 127 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 MIR3672-201ENST00000584290 82 ntBASIC-5.98□□□□□ -3.37
TOP2AP11388 SNORD45.2-201ENST00000363552 72 ntBASIC-5.99□□□□□ -3.37
TOP2AP11388 AC009161.1-201ENST00000417306 376 ntBASIC-5.99□□□□□ -3.37
TOP2AP11388 RNA5SP215-201ENST00000363440 122 ntBASIC-6□□□□□ -3.37
TOP2AP11388 Y_RNA.43-201ENST00000362670 111 ntBASIC-6.01□□□□□ -3.37
TOP2AP11388 RNU6-931P-201ENST00000363850 107 ntBASIC-6.01□□□□□ -3.37
TOP2AP11388 SNORD116-12-201ENST00000384468 92 ntBASIC-6.02□□□□□ -3.37
TOP2AP11388 snoU2_19.4-201ENST00000364329 80 ntBASIC-6.03□□□□□ -3.37
TOP2AP11388 Y_RNA.813-201ENST00000364639 102 ntBASIC-6.03□□□□□ -3.37
TOP2AP11388 AL137067.1-201ENST00000615933 120 ntBASIC-6.03□□□□□ -3.37
TOP2AP11388 SNORD63-201ENST00000384262 68 ntBASIC-6.04□□□□□ -3.38
TOP2AP11388 RNU6-248P-201ENST00000410720 107 ntBASIC-6.04□□□□□ -3.38
TOP2AP11388 Y_RNA.64-201ENST00000362845 102 ntBASIC-6.04□□□□□ -3.38
TOP2AP11388 RNU6-256P-201ENST00000516747 97 ntBASIC-6.04□□□□□ -3.38
TOP2AP11388 AL021368.1-201ENST00000607490 540 ntBASIC-6.04□□□□□ -3.38
TOP2AP11388 RNU6-1158P-201ENST00000391167 107 ntBASIC-6.05□□□□□ -3.38
TOP2AP11388 AL121895.2-201ENST00000619558 447 ntBASIC-6.05□□□□□ -3.38
TOP2AP11388 snoU18.1-201ENST00000629629 71 ntBASIC-6.05□□□□□ -3.38
TOP2AP11388 RNU6-99P-201ENST00000364721 107 ntBASIC-6.06□□□□□ -3.38
TOP2AP11388 RNU6-982P-201ENST00000516216 102 ntBASIC-6.06□□□□□ -3.38
TOP2AP11388 RNU6-551P-201ENST00000516661 103 ntBASIC-6.06□□□□□ -3.38
TOP2AP11388 RNA5SP173-201ENST00000364857 136 ntBASIC-6.08□□□□□ -3.38
TOP2AP11388 MTND1P29-201ENST00000448112 647 ntBASIC-6.08□□□□□ -3.38
TOP2AP11388 RNU6-120P-201ENST00000516077 103 ntBASIC-6.08□□□□□ -3.38
TOP2AP11388 SNORD113-5-201ENST00000607261 78 ntBASIC-6.08□□□□□ -3.38
TOP2AP11388 RNU4-90P-201ENST00000362773 141 ntBASIC-6.09□□□□□ -3.38
TOP2AP11388 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-6.09□□□□□ -3.38
TOP2AP11388 Y_RNA.772-201ENST00000606692 102 ntBASIC-6.09□□□□□ -3.38
TOP2AP11388 AC006927.3-201ENST00000638789 384 ntBASIC-6.09□□□□□ -3.38
TOP2AP11388 MTND2P30-201ENST00000456663 382 ntBASIC-6.09□□□□□ -3.39
TOP2AP11388 RNU6-334P-201ENST00000517072 102 ntBASIC-6.09□□□□□ -3.39
TOP2AP11388 RNU5F-7P-201ENST00000363696 115 ntBASIC-6.1□□□□□ -3.39
TOP2AP11388 AC139453.2-201ENST00000487255 133 ntBASIC-6.1□□□□□ -3.39
TOP2AP11388 MIR1321-201ENST00000637766 79 ntBASIC-6.1□□□□□ -3.39
TOP2AP11388 Y_RNA.373-201ENST00000365600 103 ntBASIC-6.11□□□□□ -3.39
TOP2AP11388 MIR4796-201ENST00000580742 81 ntBASIC-6.11□□□□□ -3.39
TOP2AP11388 RNU6-937P-201ENST00000384325 106 ntBASIC-6.12□□□□□ -3.39
TOP2AP11388 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-6.13□□□□□ -3.39
TOP2AP11388 SNORD77.2-201ENST00000391045 68 ntBASIC-6.13□□□□□ -3.39
TOP2AP11388 RNU6-1206P-201ENST00000516339 103 ntBASIC-6.13□□□□□ -3.39
TOP2AP11388 AC016911.1-201ENST00000613297 452 ntBASIC-6.13□□□□□ -3.39
TOP2AP11388 MIR6128-201ENST00000615528 109 ntBASIC-6.13□□□□□ -3.39
TOP2AP11388 Y_RNA.169-201ENST00000363745 96 ntBASIC-6.15□□□□□ -3.39
TOP2AP11388 Y_RNA.382-201ENST00000365672 114 ntBASIC-6.15□□□□□ -3.39
TOP2AP11388 RNU6-1009P-201ENST00000390996 107 ntBASIC-6.15□□□□□ -3.39
TOP2AP11388 RNU7-169P-201ENST00000459456 61 ntBASIC-6.15□□□□□ -3.39
TOP2AP11388 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-6.15□□□□□ -3.39
TOP2AP11388 Y_RNA.166-201ENST00000363730 102 ntBASIC-6.16□□□□□ -3.4
TOP2AP11388 RNU6-89P-201ENST00000606519 100 ntBASIC-6.16□□□□□ -3.4
TOP2AP11388 AL121914.1-201ENST00000450188 156 ntBASIC-6.17□□□□□ -3.4
TOP2AP11388 RNU6-261P-201ENST00000459506 102 ntBASIC-6.17□□□□□ -3.4
TOP2AP11388 AC090971.5-201ENST00000621102 293 ntBASIC-6.17□□□□□ -3.4
TOP2AP11388 MIR514A2-201ENST00000385131 88 ntBASIC-6.18□□□□□ -3.4
TOP2AP11388 MIR514A3-201ENST00000385132 88 ntBASIC-6.18□□□□□ -3.4
TOP2AP11388 RNU6-1241P-201ENST00000384536 107 ntBASIC-6.19□□□□□ -3.4
TOP2AP11388 Y_RNA.651-201ENST00000459380 103 ntBASIC-6.19□□□□□ -3.4
TOP2AP11388 Y_RNA.688-201ENST00000516565 95 ntBASIC-6.19□□□□□ -3.4
TOP2AP11388 MIR3675-201ENST00000583661 73 ntBASIC-6.19□□□□□ -3.4
TOP2AP11388 AC103810.7-201ENST00000607821 91 ntBASIC-6.19□□□□□ -3.4
TOP2AP11388 RNU6-662P-201ENST00000384253 104 ntBASIC-6.2□□□□□ -3.4
TOP2AP11388 RNU6-810P-201ENST00000364001 107 ntBASIC-6.2□□□□□ -3.4
TOP2AP11388 SNORD45C-201ENST00000383893 79 ntBASIC-6.2□□□□□ -3.4
TOP2AP11388 Y_RNA.473-201ENST00000384333 102 ntBASIC-6.2□□□□□ -3.4
TOP2AP11388 RNU6-1148P-201ENST00000410992 104 ntBASIC-6.2□□□□□ -3.4
TOP2AP11388 AC097520.1-201ENST00000624435 385 ntBASIC-6.2□□□□□ -3.4
TOP2AP11388 MIR4439-201ENST00000583746 80 ntBASIC-6.21□□□□□ -3.4
TOP2AP11388 AL050303.3-201ENST00000613704 284 ntBASIC-6.21□□□□□ -3.4
TOP2AP11388 MIR548D2-201ENST00000384955 97 ntBASIC-6.22□□□□□ -3.41
TOP2AP11388 Y_RNA.605-201ENST00000410577 105 ntBASIC-6.22□□□□□ -3.41
TOP2AP11388 MTND4LP1-201ENST00000446263 157 ntBASIC-6.22□□□□□ -3.41
TOP2AP11388 MIR363-201ENST00000384840 75 ntBASIC-6.23□□□□□ -3.41
TOP2AP11388 RNU6-1013P-201ENST00000384180 107 ntBASIC-6.24□□□□□ -3.41
TOP2AP11388 RNU6-911P-201ENST00000516523 104 ntBASIC-6.24□□□□□ -3.41
TOP2AP11388 SNORA20.3-201ENST00000516880 132 ntBASIC-6.24□□□□□ -3.41
TOP2AP11388 RNU6-508P-201ENST00000363231 103 ntBASIC-6.25□□□□□ -3.41
TOP2AP11388 RNA5SP224-201ENST00000365069 126 ntBASIC-6.25□□□□□ -3.41
TOP2AP11388 RNU6-1153P-201ENST00000516760 105 ntBASIC-6.25□□□□□ -3.41
TOP2AP11388 MIR7110-201ENST00000612638 86 ntBASIC-6.25□□□□□ -3.41
TOP2AP11388 MIR577-201ENST00000385196 96 ntBASIC-6.25□□□□□ -3.41
TOP2AP11388 RNU6-813P-201ENST00000384691 107 ntBASIC-6.26□□□□□ -3.41
TOP2AP11388 U2.1-201ENST00000618978 145 ntBASIC-6.26□□□□□ -3.41
TOP2AP11388 Y_RNA.17-201ENST00000362433 111 ntBASIC-6.27□□□□□ -3.41
TOP2AP11388 RNU6-211P-201ENST00000384047 107 ntBASIC-6.27□□□□□ -3.41
TOP2AP11388 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-6.27□□□□□ -3.41
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms