Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.81□□□□□ -2.7
PTPRFP10586 snoU13.17-201ENST00000458802 104 ntBASIC-1.81□□□□□ -2.7
PTPRFP10586 MTND1P19-201ENST00000511780 315 ntBASIC-1.81□□□□□ -2.7
PTPRFP10586 FGF7P7-201ENST00000514120 227 ntBASIC-1.81□□□□□ -2.7
PTPRFP10586 RNU6-168P-201ENST00000516189 101 ntBASIC-1.81□□□□□ -2.7
PTPRFP10586 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.81□□□□□ -2.7
PTPRFP10586 RNA5SP136-201ENST00000410906 107 ntBASIC-1.82□□□□□ -2.7
PTPRFP10586 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.82□□□□□ -2.7
PTPRFP10586 MIR4756-201ENST00000577874 78 ntBASIC-1.82□□□□□ -2.7
PTPRFP10586 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 RNU6-151P-201ENST00000364158 107 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 RNU6-312P-201ENST00000364629 107 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 SNORA7.5-201ENST00000410672 110 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 AC108019.1-201ENST00000512540 175 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 RNU6-118P-201ENST00000516552 102 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 MIR548D2-201ENST00000384955 97 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 RNU6-400P-201ENST00000391173 106 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 SNORD19-201ENST00000391191 68 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.83□□□□□ -2.7
PTPRFP10586 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.84□□□□□ -2.7
PTPRFP10586 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.84□□□□□ -2.7
PTPRFP10586 SNORD4B-201ENST00000459083 72 ntBASIC-1.84□□□□□ -2.7
PTPRFP10586 AC026407.1-201ENST00000518369 204 ntBASIC-1.84□□□□□ -2.7
PTPRFP10586 AC006254.2-201ENST00000603259 279 ntBASIC-1.84□□□□□ -2.7
PTPRFP10586 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
PTPRFP10586 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 AC090616.4-201ENST00000448026 115 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 RNU6-980P-201ENST00000516925 103 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 MIR487B-201ENST00000385021 84 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 MIR1302-6-201ENST00000408466 90 ntBASIC-1.85□□□□□ -2.71
PTPRFP10586 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.86□□□□□ -2.71
PTPRFP10586 RNY3P1-201ENST00000365085 102 ntBASIC-1.86□□□□□ -2.71
PTPRFP10586 RNA5SP292-201ENST00000390974 118 ntBASIC-1.86□□□□□ -2.71
PTPRFP10586 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.87□□□□□ -2.71
PTPRFP10586 RNU6-382P-201ENST00000365181 106 ntBASIC-1.87□□□□□ -2.71
PTPRFP10586 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.87□□□□□ -2.71
PTPRFP10586 MIR6874-201ENST00000635894 71 ntBASIC-1.87□□□□□ -2.71
PTPRFP10586 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.87□□□□□ -2.71
PTPRFP10586 RNU6-713P-201ENST00000384761 107 ntBASIC-1.87□□□□□ -2.71
PTPRFP10586 RNU5F-1-201ENST00000362507 117 ntBASIC-1.88□□□□□ -2.71
PTPRFP10586 RNU6-988P-201ENST00000519081 107 ntBASIC-1.88□□□□□ -2.71
PTPRFP10586 MIR3064-201ENST00000581130 66 ntBASIC-1.88□□□□□ -2.71
PTPRFP10586 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.88□□□□□ -2.71
PTPRFP10586 AL160413.1-201ENST00000622780 310 ntBASIC-1.88□□□□□ -2.71
PTPRFP10586 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.89□□□□□ -2.71
PTPRFP10586 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.89□□□□□ -2.71
PTPRFP10586 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 RNY1P11-201ENST00000363759 113 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 RNU6-246P-201ENST00000384702 107 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 SNORD116-4-201ENST00000384733 96 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 AL021921.1-201ENST00000442774 93 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 AC130289.1-201ENST00000577321 73 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 MIR3139-201ENST00000579145 76 ntBASIC-1.9□□□□□ -2.71
PTPRFP10586 RNA5SP405-201ENST00000363059 114 ntBASIC-1.91□□□□□ -2.71
PTPRFP10586 RNU6-681P-201ENST00000364012 104 ntBASIC-1.91□□□□□ -2.71
PTPRFP10586 MIR548Q-201ENST00000408404 100 ntBASIC-1.91□□□□□ -2.71
PTPRFP10586 RNU6-824P-201ENST00000363724 104 ntBASIC-1.91□□□□□ -2.72
PTPRFP10586 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.91□□□□□ -2.72
PTPRFP10586 RNU6-875P-201ENST00000516488 106 ntBASIC-1.91□□□□□ -2.72
PTPRFP10586 MIR4439-201ENST00000583746 80 ntBASIC-1.91□□□□□ -2.72
PTPRFP10586 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.92□□□□□ -2.72
PTPRFP10586 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.92□□□□□ -2.72
PTPRFP10586 MIR548Z-201ENST00000584743 97 ntBASIC-1.92□□□□□ -2.72
PTPRFP10586 SNORD45B-201ENST00000364617 72 ntBASIC-1.93□□□□□ -2.72
PTPRFP10586 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.93□□□□□ -2.72
PTPRFP10586 MIR548I1-201ENST00000408810 149 ntBASIC-1.93□□□□□ -2.72
PTPRFP10586 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.93□□□□□ -2.72
PTPRFP10586 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
PTPRFP10586 MTND3P2-201ENST00000438452 342 ntBASIC-1.93□□□□□ -2.72
PTPRFP10586 AL118496.2-201ENST00000448300 230 ntBASIC-1.93□□□□□ -2.72
PTPRFP10586 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.93□□□□□ -2.72
PTPRFP10586 MTND2P23-201ENST00000422990 651 ntBASIC-1.94□□□□□ -2.72
PTPRFP10586 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 RNU6-239P-201ENST00000390990 99 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 SNORD54-201ENST00000459159 67 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 SNORA18.5-201ENST00000516616 101 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.95□□□□□ -2.72
PTPRFP10586 MIR4773-1-201ENST00000637203 78 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 RNU6-841P-201ENST00000383872 107 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 RNU6-696P-201ENST00000390834 107 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 MIR23C-201ENST00000579846 100 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.95□□□□□ -2.72
PTPRFP10586 U6atac.1-201ENST00000616025 117 ntBASIC-1.95□□□□□ -2.72
PTPRFP10586 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.96□□□□□ -2.72
PTPRFP10586 AC134503.1-201ENST00000633048 54 ntBASIC-1.96□□□□□ -2.72
PTPRFP10586 RNU6-519P-201ENST00000410590 108 ntBASIC-1.97□□□□□ -2.72
PTPRFP10586 SNORD127-201ENST00000458892 86 ntBASIC-1.97□□□□□ -2.72
PTPRFP10586 MIR3613-201ENST00000579844 87 ntBASIC-1.97□□□□□ -2.72
PTPRFP10586 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.97□□□□□ -2.73
PTPRFP10586 AC120024.2-201ENST00000576526 175 ntBASIC-1.97□□□□□ -2.73
PTPRFP10586 MIR4680-201ENST00000580906 66 ntBASIC-1.97□□□□□ -2.73
PTPRFP10586 RNU6-644P-201ENST00000391155 98 ntBASIC-1.98□□□□□ -2.73
PTPRFP10586 RNU6-985P-201ENST00000410182 104 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 252 ms