Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR3134-201ENST00000579433 74 ntBASIC0.71□□□□□ -2.3
HLA-DOAP06340 RNU1-29P-201ENST00000606574 126 ntBASIC0.71□□□□□ -2.3
HLA-DOAP06340 U6.81-201ENST00000612550 106 ntBASIC0.71□□□□□ -2.3
HLA-DOAP06340 AC092634.7-201ENST00000621022 103 ntBASIC0.71□□□□□ -2.3
HLA-DOAP06340 RNU6-154P-201ENST00000384306 106 ntBASIC0.7□□□□□ -2.3
HLA-DOAP06340 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
HLA-DOAP06340 MIR936-201ENST00000401264 98 ntBASIC0.7□□□□□ -2.3
HLA-DOAP06340 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
HLA-DOAP06340 RN7SL793P-201ENST00000583259 296 ntBASIC0.7□□□□□ -2.3
HLA-DOAP06340 MT-TY-201ENST00000387409 66 ntBASIC0.69□□□□□ -2.3
HLA-DOAP06340 Y_RNA.606-201ENST00000410579 103 ntBASIC0.69□□□□□ -2.3
HLA-DOAP06340 AC074348.1-201ENST00000426503 132 ntBASIC0.69□□□□□ -2.3
HLA-DOAP06340 RNU6-303P-201ENST00000517091 106 ntBASIC0.69□□□□□ -2.3
HLA-DOAP06340 RNU6-495P-201ENST00000362995 107 ntBASIC0.68□□□□□ -2.3
HLA-DOAP06340 RNU2-59P-201ENST00000410482 191 ntBASIC0.68□□□□□ -2.3
HLA-DOAP06340 RNU7-74P-201ENST00000459104 62 ntBASIC0.68□□□□□ -2.3
HLA-DOAP06340 RNU6-1232P-201ENST00000516299 86 ntBASIC0.68□□□□□ -2.3
HLA-DOAP06340 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.68□□□□□ -2.3
HLA-DOAP06340 AC145423.2-201ENST00000610631 239 ntBASIC0.68□□□□□ -2.3
HLA-DOAP06340 RNU6-776P-201ENST00000364403 104 ntBASIC0.67□□□□□ -2.3
HLA-DOAP06340 RNU6-1022P-201ENST00000365049 104 ntBASIC0.67□□□□□ -2.3
HLA-DOAP06340 MIR203A-201ENST00000384836 110 ntBASIC0.67□□□□□ -2.3
HLA-DOAP06340 MIR7-2-201ENST00000384970 110 ntBASIC0.67□□□□□ -2.3
HLA-DOAP06340 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DOAP06340 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
HLA-DOAP06340 MIR548AE1-201ENST00000583292 70 ntBASIC0.66□□□□□ -2.3
HLA-DOAP06340 MIR4473-201ENST00000583731 91 ntBASIC0.66□□□□□ -2.3
HLA-DOAP06340 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HLA-DOAP06340 Y_RNA.423-201ENST00000384057 113 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 SNORD75.2-201ENST00000408784 58 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 AC006210.1-201ENST00000424882 111 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 MIR4711-201ENST00000578274 70 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 U7.4-201ENST00000614961 63 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
HLA-DOAP06340 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
HLA-DOAP06340 RNU6-990P-201ENST00000364385 104 ntBASIC0.64□□□□□ -2.31
HLA-DOAP06340 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
HLA-DOAP06340 SNORA40.8-201ENST00000411034 126 ntBASIC0.64□□□□□ -2.31
HLA-DOAP06340 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
HLA-DOAP06340 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
HLA-DOAP06340 SNORA8.1-201ENST00000384250 140 ntBASIC0.63□□□□□ -2.31
HLA-DOAP06340 RNU6-523P-201ENST00000516304 54 ntBASIC0.63□□□□□ -2.31
HLA-DOAP06340 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
HLA-DOAP06340 AC069503.3-201ENST00000618674 145 ntBASIC0.63□□□□□ -2.31
HLA-DOAP06340 MIR6755-201ENST00000619993 66 ntBASIC0.63□□□□□ -2.31
HLA-DOAP06340 Y_RNA.565-201ENST00000384719 101 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 MIR216B-201ENST00000390186 82 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 RNU6-380P-201ENST00000410207 107 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 HMGN2P22-201ENST00000427588 175 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 RNU6-70P-201ENST00000516438 60 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 RNU6-807P-201ENST00000516805 107 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 MIR4662A-201ENST00000637499 67 ntBASIC0.62□□□□□ -2.31
HLA-DOAP06340 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
HLA-DOAP06340 AL691482.2-201ENST00000457453 84 ntBASIC0.61□□□□□ -2.31
HLA-DOAP06340 RNU6-274P-201ENST00000459566 107 ntBASIC0.61□□□□□ -2.31
HLA-DOAP06340 SNORA40.17-201ENST00000517256 115 ntBASIC0.61□□□□□ -2.31
HLA-DOAP06340 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
HLA-DOAP06340 MIR1297-201ENST00000637311 77 ntBASIC0.61□□□□□ -2.31
HLA-DOAP06340 SNORD114-23-201ENST00000363536 72 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 RNU6-681P-201ENST00000364012 104 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 RNU6-1039P-201ENST00000383931 107 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 RNU7-24P-201ENST00000458867 62 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 MIR6509-201ENST00000614603 85 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 MIR6779-201ENST00000617283 64 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 AC073869.9-201ENST00000641610 120 ntBASIC0.6□□□□□ -2.31
HLA-DOAP06340 MIR652-201ENST00000385278 98 ntBASIC0.59□□□□□ -2.31
HLA-DOAP06340 SNORA68.3-201ENST00000515906 83 ntBASIC0.59□□□□□ -2.31
HLA-DOAP06340 MIR3675-201ENST00000583661 73 ntBASIC0.59□□□□□ -2.31
HLA-DOAP06340 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
HLA-DOAP06340 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
HLA-DOAP06340 RNA5SP147-201ENST00000516493 109 ntBASIC0.58□□□□□ -2.32
HLA-DOAP06340 RNU6-1015P-201ENST00000517121 99 ntBASIC0.58□□□□□ -2.32
HLA-DOAP06340 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
HLA-DOAP06340 MIR103A1-201ENST00000362165 78 ntBASIC0.57□□□□□ -2.32
HLA-DOAP06340 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
HLA-DOAP06340 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.57□□□□□ -2.32
HLA-DOAP06340 RNU6-687P-201ENST00000516443 89 ntBASIC0.57□□□□□ -2.32
HLA-DOAP06340 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
HLA-DOAP06340 snoU13.13-201ENST00000458842 104 ntBASIC0.56□□□□□ -2.32
HLA-DOAP06340 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
HLA-DOAP06340 SNORD45.1-201ENST00000363181 77 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 Y_RNA.205-201ENST00000364128 113 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 MIR582-201ENST00000365731 98 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 RNU6-1296P-201ENST00000383879 107 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 Y_RNA.407-201ENST00000383986 113 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 RNU6-1241P-201ENST00000384536 107 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 Y_RNA.545-201ENST00000384652 105 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 MIR193B-201ENST00000384907 83 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 RNU6-604P-201ENST00000390917 100 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 Y_RNA.681-201ENST00000516445 113 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 MIR3657-201ENST00000584818 117 ntBASIC0.55□□□□□ -2.32
HLA-DOAP06340 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
HLA-DOAP06340 SNORD115-31-201ENST00000365318 82 ntBASIC0.54□□□□□ -2.32
HLA-DOAP06340 SNORA2A-201ENST00000383885 135 ntBASIC0.54□□□□□ -2.32
HLA-DOAP06340 RNU6-260P-201ENST00000384092 107 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms