Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 MIR4452-201ENST00000583004 71 ntBASIC1.31□□□□□ -2.2
KRT1P04264 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRT1P04264 RNU6-990P-201ENST00000364385 104 ntBASIC1.3□□□□□ -2.2
KRT1P04264 RNU6-936P-201ENST00000384005 107 ntBASIC1.3□□□□□ -2.2
KRT1P04264 SNORD28-201ENST00000384706 75 ntBASIC1.3□□□□□ -2.2
KRT1P04264 SNORD12-201ENST00000391002 90 ntBASIC1.3□□□□□ -2.2
KRT1P04264 RNA5SP220-201ENST00000516298 104 ntBASIC1.3□□□□□ -2.2
KRT1P04264 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.3□□□□□ -2.2
KRT1P04264 SNORA70.22-201ENST00000517160 124 ntBASIC1.3□□□□□ -2.2
KRT1P04264 SNORA40.17-201ENST00000517256 115 ntBASIC1.3□□□□□ -2.2
KRT1P04264 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
KRT1P04264 MIR548V-201ENST00000584165 80 ntBASIC1.3□□□□□ -2.2
KRT1P04264 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
KRT1P04264 AC244669.1-204ENST00000621564 178 ntBASIC1.3□□□□□ -2.2
KRT1P04264 MIR521-2-201ENST00000384818 87 ntBASIC1.29□□□□□ -2.2
KRT1P04264 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
KRT1P04264 MIR644A-201ENST00000385262 94 ntBASIC1.29□□□□□ -2.2
KRT1P04264 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
KRT1P04264 MIR6734-201ENST00000621166 68 ntBASIC1.29□□□□□ -2.2
KRT1P04264 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRT1P04264 SNORD60.1-201ENST00000362451 73 ntBASIC1.28□□□□□ -2.2
KRT1P04264 RNU6-1184P-201ENST00000384588 108 ntBASIC1.28□□□□□ -2.2
KRT1P04264 MIR548C-201ENST00000384815 97 ntBASIC1.28□□□□□ -2.2
KRT1P04264 RNU1-141P-201ENST00000364623 158 ntBASIC1.27□□□□□ -2.21
KRT1P04264 SNORD113-2-201ENST00000391082 72 ntBASIC1.27□□□□□ -2.21
KRT1P04264 AL157398.1-201ENST00000452981 186 ntBASIC1.27□□□□□ -2.21
KRT1P04264 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
KRT1P04264 RNU6-726P-201ENST00000364680 107 ntBASIC1.26□□□□□ -2.21
KRT1P04264 SNORD113-4-201ENST00000364802 75 ntBASIC1.26□□□□□ -2.21
KRT1P04264 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
KRT1P04264 MIR630-201ENST00000384957 97 ntBASIC1.26□□□□□ -2.21
KRT1P04264 MIR517B-201ENST00000385102 67 ntBASIC1.26□□□□□ -2.21
KRT1P04264 SNORA15B-2-201ENST00000384058 135 ntBASIC1.25□□□□□ -2.21
KRT1P04264 SNORA15B-1-201ENST00000384334 135 ntBASIC1.25□□□□□ -2.21
KRT1P04264 SNORA75.1-201ENST00000391130 148 ntBASIC1.25□□□□□ -2.21
KRT1P04264 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
KRT1P04264 RNU6-698P-201ENST00000363523 107 ntBASIC1.24□□□□□ -2.21
KRT1P04264 RNU6-34P-201ENST00000364874 107 ntBASIC1.24□□□□□ -2.21
KRT1P04264 SNORA8.2-201ENST00000384372 139 ntBASIC1.24□□□□□ -2.21
KRT1P04264 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KRT1P04264 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
KRT1P04264 RNU6-1110P-201ENST00000516462 101 ntBASIC1.24□□□□□ -2.21
KRT1P04264 RNA5SP47-201ENST00000517230 109 ntBASIC1.24□□□□□ -2.21
KRT1P04264 uc_338.10-201ENST00000621872 182 ntBASIC1.24□□□□□ -2.21
KRT1P04264 SNORD18A-201ENST00000363753 72 ntBASIC1.23□□□□□ -2.21
KRT1P04264 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
KRT1P04264 RNU6-520P-201ENST00000384717 104 ntBASIC1.23□□□□□ -2.21
KRT1P04264 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
KRT1P04264 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
KRT1P04264 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.23□□□□□ -2.21
KRT1P04264 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRT1P04264 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
KRT1P04264 AC021146.9-201ENST00000512503 156 ntBASIC1.22□□□□□ -2.21
KRT1P04264 RNU5B-6P-201ENST00000516765 68 ntBASIC1.22□□□□□ -2.21
KRT1P04264 AC022709.1-201ENST00000615967 87 ntBASIC1.22□□□□□ -2.21
KRT1P04264 RNU6-716P-201ENST00000365621 103 ntBASIC1.21□□□□□ -2.22
KRT1P04264 SNORD105-201ENST00000386910 85 ntBASIC1.21□□□□□ -2.22
KRT1P04264 SNORD89-201ENST00000390981 114 ntBASIC1.21□□□□□ -2.22
KRT1P04264 RNU6-269P-201ENST00000391077 97 ntBASIC1.21□□□□□ -2.22
KRT1P04264 FABP5P4-201ENST00000437203 171 ntBASIC1.21□□□□□ -2.22
KRT1P04264 snoU13.13-201ENST00000458842 104 ntBASIC1.21□□□□□ -2.22
KRT1P04264 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
KRT1P04264 RNU7-174P-201ENST00000516248 59 ntBASIC1.21□□□□□ -2.22
KRT1P04264 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
KRT1P04264 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.21□□□□□ -2.22
KRT1P04264 U2.7-201ENST00000619197 100 ntBASIC1.2□□□□□ -2.22
KRT1P04264 MIR6515-201ENST00000619843 57 ntBASIC1.2□□□□□ -2.22
KRT1P04264 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
KRT1P04264 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.2□□□□□ -2.22
KRT1P04264 Y_RNA.633-201ENST00000459107 95 ntBASIC1.19□□□□□ -2.22
KRT1P04264 SCARNA16.5-201ENST00000517114 183 ntBASIC1.19□□□□□ -2.22
KRT1P04264 MIR3678-201ENST00000578455 94 ntBASIC1.19□□□□□ -2.22
KRT1P04264 RNU6-1312P-201ENST00000362425 108 ntBASIC1.18□□□□□ -2.22
KRT1P04264 RNA5SP484-201ENST00000458857 111 ntBASIC1.18□□□□□ -2.22
KRT1P04264 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
KRT1P04264 Y_RNA.125-201ENST00000363371 111 ntBASIC1.17□□□□□ -2.22
KRT1P04264 Y_RNA.407-201ENST00000383986 113 ntBASIC1.17□□□□□ -2.22
KRT1P04264 RNU7-119P-201ENST00000459279 63 ntBASIC1.17□□□□□ -2.22
KRT1P04264 SCARNA17.3-201ENST00000516381 125 ntBASIC1.17□□□□□ -2.22
KRT1P04264 U4.4-201ENST00000620626 117 ntBASIC1.17□□□□□ -2.22
KRT1P04264 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
KRT1P04264 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
KRT1P04264 SNORA63.6-201ENST00000364921 119 ntBASIC1.16□□□□□ -2.22
KRT1P04264 SNORA33.1-201ENST00000364957 130 ntBASIC1.16□□□□□ -2.22
KRT1P04264 Y_RNA.379-201ENST00000365653 102 ntBASIC1.16□□□□□ -2.22
KRT1P04264 AL162376.1-201ENST00000624117 175 ntBASIC1.16□□□□□ -2.22
KRT1P04264 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
KRT1P04264 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
KRT1P04264 MIR3612-201ENST00000579753 87 ntBASIC1.15□□□□□ -2.23
KRT1P04264 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
KRT1P04264 MIR652-201ENST00000385278 98 ntBASIC1.14□□□□□ -2.23
KRT1P04264 MIR6828-201ENST00000636181 60 ntBASIC1.14□□□□□ -2.23
KRT1P04264 Y_RNA.246-201ENST00000364495 108 ntBASIC1.13□□□□□ -2.23
KRT1P04264 MIR598-201ENST00000384868 97 ntBASIC1.13□□□□□ -2.23
KRT1P04264 MIR200A-201ENST00000384875 90 ntBASIC1.13□□□□□ -2.23
KRT1P04264 RNU4-88P-201ENST00000411220 86 ntBASIC1.13□□□□□ -2.23
KRT1P04264 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.13□□□□□ -2.23
KRT1P04264 AC025627.3-201ENST00000582078 182 ntBASIC1.13□□□□□ -2.23
KRT1P04264 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
KRT1P04264 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms