Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SNORD116-18-201ENST00000383961 92 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 MIR548Z-201ENST00000584743 97 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 AC103810.7-201ENST00000607821 91 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 AC025166.1-201ENST00000612411 163 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 AL445584.3-201ENST00000617173 78 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 MIR6738-201ENST00000619620 64 ntBASIC-1.31□□□□□ -2.62
MT-ND3P03897 RNY4P6-201ENST00000363667 96 ntBASIC-1.32□□□□□ -2.62
MT-ND3P03897 SNORA33.1-201ENST00000364957 130 ntBASIC-1.32□□□□□ -2.62
MT-ND3P03897 RNU6-382P-201ENST00000365181 106 ntBASIC-1.32□□□□□ -2.62
MT-ND3P03897 RNA5SP470-201ENST00000516463 106 ntBASIC-1.32□□□□□ -2.62
MT-ND3P03897 snoU83B.1-201ENST00000517136 88 ntBASIC-1.32□□□□□ -2.62
MT-ND3P03897 MIR378F-201ENST00000578143 78 ntBASIC-1.32□□□□□ -2.62
MT-ND3P03897 RNU6-832P-201ENST00000363319 107 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 RNU4-32P-201ENST00000363404 141 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 SNORD58C-201ENST00000365223 64 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 RNU6-574P-201ENST00000384265 107 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 MIR513C-201ENST00000401352 84 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 SNORD75.2-201ENST00000408784 58 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 snoU13.17-201ENST00000458802 104 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 MIR4694-201ENST00000578534 80 ntBASIC-1.33□□□□□ -2.62
MT-ND3P03897 RNU6-10P-201ENST00000384036 107 ntBASIC-1.34□□□□□ -2.62
MT-ND3P03897 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.34□□□□□ -2.62
MT-ND3P03897 MTND3P2-201ENST00000438452 342 ntBASIC-1.34□□□□□ -2.62
MT-ND3P03897 RNU7-134P-201ENST00000458997 64 ntBASIC-1.34□□□□□ -2.62
MT-ND3P03897 SNORD4B-201ENST00000459083 72 ntBASIC-1.34□□□□□ -2.62
MT-ND3P03897 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.34□□□□□ -2.62
MT-ND3P03897 SNORA62.4-201ENST00000365504 151 ntBASIC-1.35□□□□□ -2.63
MT-ND3P03897 MIR548A1-201ENST00000385041 97 ntBASIC-1.35□□□□□ -2.63
MT-ND3P03897 MIR1255B2-201ENST00000408618 67 ntBASIC-1.35□□□□□ -2.63
MT-ND3P03897 SCARNA17-201ENST00000516183 144 ntBASIC-1.35□□□□□ -2.63
MT-ND3P03897 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.36□□□□□ -2.63
MT-ND3P03897 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.36□□□□□ -2.63
MT-ND3P03897 MIR548U-201ENST00000390728 81 ntBASIC-1.36□□□□□ -2.63
MT-ND3P03897 AP001340.1-201ENST00000624405 217 ntBASIC-1.36□□□□□ -2.63
MT-ND3P03897 MIR4773-1-201ENST00000637203 78 ntBASIC-1.36□□□□□ -2.63
MT-ND3P03897 RNY3P2-201ENST00000362918 102 ntBASIC-1.37□□□□□ -2.63
MT-ND3P03897 RNU6-746P-201ENST00000384112 109 ntBASIC-1.37□□□□□ -2.63
MT-ND3P03897 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.37□□□□□ -2.63
MT-ND3P03897 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.37□□□□□ -2.63
MT-ND3P03897 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.38□□□□□ -2.63
MT-ND3P03897 RNU6-824P-201ENST00000363724 104 ntBASIC-1.38□□□□□ -2.63
MT-ND3P03897 RNU6-804P-201ENST00000384286 107 ntBASIC-1.38□□□□□ -2.63
MT-ND3P03897 RNU2-51P-201ENST00000410708 197 ntBASIC-1.38□□□□□ -2.63
MT-ND3P03897 SNORA18.5-201ENST00000516616 101 ntBASIC-1.38□□□□□ -2.63
MT-ND3P03897 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.39□□□□□ -2.63
MT-ND3P03897 RNU7-24P-201ENST00000458867 62 ntBASIC-1.39□□□□□ -2.63
MT-ND3P03897 RNU6-327P-201ENST00000516270 127 ntBASIC-1.39□□□□□ -2.63
MT-ND3P03897 MIR548X2-201ENST00000579776 100 ntBASIC-1.39□□□□□ -2.63
MT-ND3P03897 U7.2-201ENST00000607576 63 ntBASIC-1.39□□□□□ -2.63
MT-ND3P03897 RNU6-260P-201ENST00000384092 107 ntBASIC-1.4□□□□□ -2.63
MT-ND3P03897 MIR569-201ENST00000385228 96 ntBASIC-1.4□□□□□ -2.63
MT-ND3P03897 MIR548I1-201ENST00000408810 149 ntBASIC-1.4□□□□□ -2.63
MT-ND3P03897 RNU6-795P-201ENST00000516323 103 ntBASIC-1.4□□□□□ -2.63
MT-ND3P03897 MIR4324-201ENST00000584846 72 ntBASIC-1.4□□□□□ -2.63
MT-ND3P03897 MIR4320-201ENST00000636981 65 ntBASIC-1.4□□□□□ -2.63
MT-ND3P03897 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
MT-ND3P03897 RNU6-644P-201ENST00000391155 98 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 RNU6-519P-201ENST00000410590 108 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 RNU7-120P-201ENST00000459334 63 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 SNORD63.1-201ENST00000516178 80 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 MIR4503-201ENST00000582187 83 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 MIR6509-201ENST00000614603 85 ntBASIC-1.41□□□□□ -2.64
MT-ND3P03897 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 RNU6-813P-201ENST00000384691 107 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 MIR1468-201ENST00000410600 86 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 RNU6-772P-201ENST00000516042 105 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 CYP3A54P-201ENST00000566950 75 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 MIR3657-201ENST00000584818 117 ntBASIC-1.42□□□□□ -2.64
MT-ND3P03897 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.43□□□□□ -2.64
MT-ND3P03897 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.43□□□□□ -2.64
MT-ND3P03897 MIR4777-201ENST00000583710 86 ntBASIC-1.43□□□□□ -2.64
MT-ND3P03897 SNORD115-22-201ENST00000364456 82 ntBASIC-1.44□□□□□ -2.64
MT-ND3P03897 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.44□□□□□ -2.64
MT-ND3P03897 AC012531.4-201ENST00000616509 177 ntBASIC-1.44□□□□□ -2.64
MT-ND3P03897 SNORD45B-201ENST00000364617 72 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 RNU6-196P-201ENST00000384315 107 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 MIR8485-201ENST00000401372 91 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 RNU6-394P-201ENST00000410735 107 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 RNU6-426P-201ENST00000516464 97 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 MTND5P41-201ENST00000517498 206 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 AC006254.2-201ENST00000603259 279 ntBASIC-1.45□□□□□ -2.64
MT-ND3P03897 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.46□□□□□ -2.64
MT-ND3P03897 RNU7-107P-201ENST00000459121 61 ntBASIC-1.46□□□□□ -2.64
MT-ND3P03897 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.46□□□□□ -2.64
MT-ND3P03897 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.47□□□□□ -2.64
MT-ND3P03897 MTATP6P29-201ENST00000415057 132 ntBASIC-1.47□□□□□ -2.64
MT-ND3P03897 RNU6-62P-201ENST00000516526 102 ntBASIC-1.47□□□□□ -2.64
MT-ND3P03897 SNORA2.1-201ENST00000363089 137 ntBASIC-1.48□□□□□ -2.65
MT-ND3P03897 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 321.7 ms