Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
SPDEFO95238 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
SPDEFO95238 MIR3973-201ENST00000579824 107 ntBASIC0.6□□□□□ -2.31
SPDEFO95238 MIR6509-201ENST00000614603 85 ntBASIC0.6□□□□□ -2.31
SPDEFO95238 MIR6767-201ENST00000637302 66 ntBASIC0.6□□□□□ -2.31
SPDEFO95238 SNORD114-4-201ENST00000363962 75 ntBASIC0.59□□□□□ -2.31
SPDEFO95238 RNU6-587P-201ENST00000391282 106 ntBASIC0.59□□□□□ -2.31
SPDEFO95238 RNU6-687P-201ENST00000516443 89 ntBASIC0.59□□□□□ -2.31
SPDEFO95238 RNU6-1015P-201ENST00000517121 99 ntBASIC0.59□□□□□ -2.31
SPDEFO95238 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.58□□□□□ -2.32
SPDEFO95238 MIR373-201ENST00000362273 69 ntBASIC0.58□□□□□ -2.32
SPDEFO95238 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
SPDEFO95238 Y_RNA.407-201ENST00000383986 113 ntBASIC0.58□□□□□ -2.32
SPDEFO95238 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
SPDEFO95238 MIR4473-201ENST00000583731 91 ntBASIC0.58□□□□□ -2.32
SPDEFO95238 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
SPDEFO95238 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
SPDEFO95238 SNORA2A-201ENST00000383885 135 ntBASIC0.57□□□□□ -2.32
SPDEFO95238 RNU6-1241P-201ENST00000384536 107 ntBASIC0.57□□□□□ -2.32
SPDEFO95238 HMGN2P22-201ENST00000427588 175 ntBASIC0.57□□□□□ -2.32
SPDEFO95238 MIR548AE1-201ENST00000583292 70 ntBASIC0.57□□□□□ -2.32
SPDEFO95238 Y_RNA.423-201ENST00000384057 113 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 RNU6-260P-201ENST00000384092 107 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 MIR203A-201ENST00000384836 110 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 MIR520E-201ENST00000384867 87 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 RNU6-848P-201ENST00000515948 107 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 RNU6-617P-201ENST00000516147 107 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 RNU6-473P-201ENST00000516164 107 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 RNU6-1049P-201ENST00000516414 107 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 MIR3124-201ENST00000582636 67 ntBASIC0.56□□□□□ -2.32
SPDEFO95238 SNORD45.1-201ENST00000363181 77 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 Y_RNA.125-201ENST00000363371 111 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 MIR154-201ENST00000385243 84 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 MIR652-201ENST00000385278 98 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 MIR3657-201ENST00000584818 117 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 MIR6755-201ENST00000619993 66 ntBASIC0.55□□□□□ -2.32
SPDEFO95238 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
SPDEFO95238 MIR96-201ENST00000362288 78 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 RNU6-990P-201ENST00000364385 104 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 MIR7-2-201ENST00000384970 110 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 MIR1276-201ENST00000408707 83 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 RNU6-863P-201ENST00000515989 104 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 SCARNA17.3-201ENST00000516381 125 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 SNORA40.17-201ENST00000517256 115 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 U7.6-201ENST00000610841 64 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 MIR8053-201ENST00000613344 75 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 MIR6835-201ENST00000621552 64 ntBASIC0.54□□□□□ -2.32
SPDEFO95238 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
SPDEFO95238 RNU6-604P-201ENST00000390917 100 ntBASIC0.53□□□□□ -2.32
SPDEFO95238 RNU6-634P-201ENST00000459134 106 ntBASIC0.53□□□□□ -2.32
SPDEFO95238 RNU6-871P-201ENST00000516122 100 ntBASIC0.53□□□□□ -2.32
SPDEFO95238 uc_338.10-201ENST00000621872 182 ntBASIC0.53□□□□□ -2.32
SPDEFO95238 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
SPDEFO95238 SNORA2.1-201ENST00000363089 137 ntBASIC0.52□□□□□ -2.33
SPDEFO95238 SNORD115-22-201ENST00000364456 82 ntBASIC0.52□□□□□ -2.33
SPDEFO95238 AC073261.1-201ENST00000429409 121 ntBASIC0.52□□□□□ -2.33
SPDEFO95238 RNU6-1232P-201ENST00000516299 86 ntBASIC0.52□□□□□ -2.33
SPDEFO95238 CYP3A137P-201ENST00000562436 69 ntBASIC0.52□□□□□ -2.33
SPDEFO95238 MIR6504-201ENST00000613520 61 ntBASIC0.52□□□□□ -2.33
SPDEFO95238 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SPDEFO95238 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
SPDEFO95238 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
SPDEFO95238 SNORD115-31-201ENST00000365318 82 ntBASIC0.5□□□□□ -2.33
SPDEFO95238 MIR760-201ENST00000390220 80 ntBASIC0.5□□□□□ -2.33
SPDEFO95238 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
SPDEFO95238 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
SPDEFO95238 MIR8070-201ENST00000616510 88 ntBASIC0.5□□□□□ -2.33
SPDEFO95238 SNORD45A-201ENST00000384512 84 ntBASIC0.49□□□□□ -2.33
SPDEFO95238 MIR501-201ENST00000390204 84 ntBASIC0.49□□□□□ -2.33
SPDEFO95238 Y_RNA.250-201ENST00000364542 110 ntBASIC0.48□□□□□ -2.33
SPDEFO95238 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
SPDEFO95238 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
SPDEFO95238 RNA5SP147-201ENST00000516493 109 ntBASIC0.48□□□□□ -2.33
SPDEFO95238 MIR4677-201ENST00000584153 80 ntBASIC0.48□□□□□ -2.33
SPDEFO95238 SNORD113.1-201ENST00000363280 73 ntBASIC0.47□□□□□ -2.33
SPDEFO95238 MIR582-201ENST00000365731 98 ntBASIC0.47□□□□□ -2.33
SPDEFO95238 MIR548E-201ENST00000408287 88 ntBASIC0.47□□□□□ -2.33
SPDEFO95238 RNU6-881P-201ENST00000516813 102 ntBASIC0.47□□□□□ -2.33
SPDEFO95238 MIR548AD-201ENST00000584780 82 ntBASIC0.47□□□□□ -2.33
SPDEFO95238 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
SPDEFO95238 SNORD114-22-201ENST00000365423 72 ntBASIC0.46□□□□□ -2.34
SPDEFO95238 RNU6-540P-201ENST00000384622 101 ntBASIC0.46□□□□□ -2.34
SPDEFO95238 MIR516B1-201ENST00000385211 90 ntBASIC0.46□□□□□ -2.34
SPDEFO95238 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SPDEFO95238 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
SPDEFO95238 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 MIR20A-201ENST00000362279 71 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 SNORA63.6-201ENST00000364921 119 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 RNU6-895P-201ENST00000384125 103 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 AC244090.1-201ENST00000441884 93 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 AC114801.3-201ENST00000510231 177 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 MIR6739-201ENST00000622461 75 ntBASIC0.45□□□□□ -2.34
SPDEFO95238 SNORD114-29-201ENST00000364819 70 ntBASIC0.44□□□□□ -2.34
SPDEFO95238 AC021146.9-201ENST00000512503 156 ntBASIC0.44□□□□□ -2.34
SPDEFO95238 RNU6-982P-201ENST00000516216 102 ntBASIC0.44□□□□□ -2.34
SPDEFO95238 MIR4452-201ENST00000583004 71 ntBASIC0.44□□□□□ -2.34
SPDEFO95238 MIR151B-201ENST00000584249 96 ntBASIC0.44□□□□□ -2.34
SPDEFO95238 MIR6788-201ENST00000618842 66 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms