Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.31□□□□□ -2.62
SNRNP200O75643 U6.96-201ENST00000636425 70 ntBASIC-1.31□□□□□ -2.62
SNRNP200O75643 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.31□□□□□ -2.62
SNRNP200O75643 MIR521-2-201ENST00000384818 87 ntBASIC-1.31□□□□□ -2.62
SNRNP200O75643 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
SNRNP200O75643 RNU2-38P-201ENST00000410856 79 ntBASIC-1.31□□□□□ -2.62
SNRNP200O75643 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.31□□□□□ -2.62
SNRNP200O75643 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.32□□□□□ -2.62
SNRNP200O75643 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.32□□□□□ -2.62
SNRNP200O75643 AC072026.1-201ENST00000605023 201 ntBASIC-1.32□□□□□ -2.62
SNRNP200O75643 RNU6-226P-201ENST00000363778 107 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 SNORD45B-201ENST00000364617 72 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 RNU6-382P-201ENST00000365181 106 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 RNU6-412P-201ENST00000516434 106 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 U7.2-201ENST00000607576 63 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 MIR6502-201ENST00000617296 76 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 SNORA2.1-201ENST00000363089 137 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 RNY1P11-201ENST00000363759 113 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 RNU6-80P-201ENST00000384195 107 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 FGF7P7-201ENST00000514120 227 ntBASIC-1.33□□□□□ -2.62
SNRNP200O75643 RNY3P2-201ENST00000362918 102 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 RNU6-816P-201ENST00000390914 107 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 AL035461.1-201ENST00000421490 332 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 MIR8062-201ENST00000621515 85 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 MIR4773-1-201ENST00000637203 78 ntBASIC-1.34□□□□□ -2.62
SNRNP200O75643 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.35□□□□□ -2.63
SNRNP200O75643 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.35□□□□□ -2.63
SNRNP200O75643 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.35□□□□□ -2.63
SNRNP200O75643 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 AL078595.1-201ENST00000404458 226 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 SNORD115-27-201ENST00000364430 82 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 RNU6-752P-201ENST00000516376 102 ntBASIC-1.36□□□□□ -2.63
SNRNP200O75643 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 SNORA7.5-201ENST00000410672 110 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 RNY4P6-201ENST00000363667 96 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 MIR513C-201ENST00000401352 84 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 AL021921.1-201ENST00000442774 93 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 RNA5SP180-201ENST00000516181 101 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 MIR4439-201ENST00000583746 80 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 AC006254.2-201ENST00000603259 279 ntBASIC-1.37□□□□□ -2.63
SNRNP200O75643 SNORD116-10-201ENST00000363791 102 ntBASIC-1.38□□□□□ -2.63
SNRNP200O75643 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.38□□□□□ -2.63
SNRNP200O75643 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.38□□□□□ -2.63
SNRNP200O75643 RNU6-639P-201ENST00000384074 107 ntBASIC-1.38□□□□□ -2.63
SNRNP200O75643 RNU6-246P-201ENST00000384702 107 ntBASIC-1.38□□□□□ -2.63
SNRNP200O75643 MIR548S-201ENST00000581352 82 ntBASIC-1.38□□□□□ -2.63
SNRNP200O75643 RNA5SP26-201ENST00000362406 119 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 RNU4-40P-201ENST00000364351 143 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 RNU7-61P-201ENST00000515897 61 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 MIR4441-201ENST00000582623 100 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 RNU6-824P-201ENST00000363724 104 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 MIR507-201ENST00000385234 94 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.39□□□□□ -2.63
SNRNP200O75643 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 MIR1263-201ENST00000408324 86 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 AC022559.1-201ENST00000520905 205 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 MIR4679-2-201ENST00000578358 77 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
SNRNP200O75643 RNU6-519P-201ENST00000410590 108 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.4□□□□□ -2.63
SNRNP200O75643 RNU6-681P-201ENST00000364012 104 ntBASIC-1.41□□□□□ -2.64
SNRNP200O75643 SNORD19-201ENST00000391191 68 ntBASIC-1.41□□□□□ -2.64
SNRNP200O75643 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.41□□□□□ -2.64
SNRNP200O75643 RNU6-772P-201ENST00000516042 105 ntBASIC-1.41□□□□□ -2.64
SNRNP200O75643 AC120024.2-201ENST00000576526 175 ntBASIC-1.41□□□□□ -2.64
SNRNP200O75643 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 SNORA18.5-201ENST00000516616 101 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 RNU6-158P-201ENST00000517104 100 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 MIR4796-201ENST00000580742 81 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 MIR4777-201ENST00000583710 86 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 AC025166.1-201ENST00000612411 163 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 RNU4-11P-201ENST00000365287 132 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.42□□□□□ -2.64
SNRNP200O75643 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms