Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-275P-201ENST00000364910 107 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 RPL35AP4-201ENST00000412007 102 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 RNU7-24P-201ENST00000458867 62 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 RNU7-154P-201ENST00000516194 62 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 MIR4490-201ENST00000582647 84 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 RNU6-90P-201ENST00000606352 106 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 AL137067.1-201ENST00000615933 120 ntBASIC-1.4□□□□□ -2.63
SHOX2O60902 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 RNU6-309P-201ENST00000364573 106 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 RNU6-493P-201ENST00000391321 108 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 RNU6-75P-201ENST00000515944 104 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 MIR23C-201ENST00000579846 100 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 MIR4795-201ENST00000584182 89 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.41□□□□□ -2.64
SHOX2O60902 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 SNORD38.1-201ENST00000363863 68 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.42□□□□□ -2.64
SHOX2O60902 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.42□□□□□ -2.64
SHOX2O60902 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.43□□□□□ -2.64
SHOX2O60902 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.43□□□□□ -2.64
SHOX2O60902 SNORA75.5-201ENST00000391291 81 ntBASIC-1.43□□□□□ -2.64
SHOX2O60902 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.43□□□□□ -2.64
SHOX2O60902 AC012531.4-201ENST00000616509 177 ntBASIC-1.43□□□□□ -2.64
SHOX2O60902 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
SHOX2O60902 SNORA7.5-201ENST00000410672 110 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 MTND1P19-201ENST00000511780 315 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 U6.106-201ENST00000636360 105 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 U6.96-201ENST00000636425 70 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 U6.104-201ENST00000637979 90 ntBASIC-1.44□□□□□ -2.64
SHOX2O60902 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.45□□□□□ -2.64
SHOX2O60902 MT-TD-201ENST00000387419 68 ntBASIC-1.45□□□□□ -2.64
SHOX2O60902 MIR466-201ENST00000580653 84 ntBASIC-1.45□□□□□ -2.64
SHOX2O60902 MIR3163-201ENST00000581592 73 ntBASIC-1.45□□□□□ -2.64
SHOX2O60902 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.46□□□□□ -2.64
SHOX2O60902 RNU6-713P-201ENST00000384761 107 ntBASIC-1.46□□□□□ -2.64
SHOX2O60902 MIR1255B2-201ENST00000408618 67 ntBASIC-1.46□□□□□ -2.64
SHOX2O60902 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.46□□□□□ -2.64
SHOX2O60902 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.46□□□□□ -2.64
SHOX2O60902 AC021753.1-201ENST00000635724 168 ntBASIC-1.46□□□□□ -2.64
SHOX2O60902 AL512310.12-203ENST00000640543 90 ntBASIC-1.46□□□□□ -2.64
SHOX2O60902 RNU6-832P-201ENST00000363319 107 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 RNU6-990P-201ENST00000364385 104 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 SNORD18B-201ENST00000365659 72 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 SNORA24B-201ENST00000384176 131 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 RNU6-246P-201ENST00000384702 107 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 CYP3A54P-201ENST00000566950 75 ntBASIC-1.47□□□□□ -2.64
SHOX2O60902 RNU6-608P-201ENST00000383927 104 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.48□□□□□ -2.65
SHOX2O60902 FGF7P7-201ENST00000514120 227 ntBASIC-1.49□□□□□ -2.65
SHOX2O60902 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.49□□□□□ -2.65
SHOX2O60902 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.49□□□□□ -2.65
SHOX2O60902 MIR4680-201ENST00000580906 66 ntBASIC-1.49□□□□□ -2.65
SHOX2O60902 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 RNU6-363P-201ENST00000362895 105 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 RNU6-474P-201ENST00000384243 107 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 MIR519A2-201ENST00000384990 87 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 MIR548A1-201ENST00000385041 97 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 MTND5P20-201ENST00000448677 143 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 MIR6844-201ENST00000637122 62 ntBASIC-1.5□□□□□ -2.65
SHOX2O60902 SNORA33.1-201ENST00000364957 130 ntBASIC-1.51□□□□□ -2.65
SHOX2O60902 MIR513C-201ENST00000401352 84 ntBASIC-1.51□□□□□ -2.65
SHOX2O60902 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.51□□□□□ -2.65
SHOX2O60902 FTX_4.1-201ENST00000616291 147 ntBASIC-1.51□□□□□ -2.65
SHOX2O60902 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 SNORD115-31-201ENST00000365318 82 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 MIR759-201ENST00000390224 91 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 snoU13.17-201ENST00000458802 104 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 MIR3646-201ENST00000578301 84 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 MIR548W-201ENST00000581970 74 ntBASIC-1.52□□□□□ -2.65
SHOX2O60902 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.53□□□□□ -2.65
SHOX2O60902 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.53□□□□□ -2.65
SHOX2O60902 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.53□□□□□ -2.65
SHOX2O60902 MT-TW-201ENST00000387382 68 ntBASIC-1.53□□□□□ -2.65
SHOX2O60902 U7.5-201ENST00000517224 61 ntBASIC-1.53□□□□□ -2.65
SHOX2O60902 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 SNORA63.2-201ENST00000362603 126 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 RNU6-260P-201ENST00000384092 107 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 MIR509-1-201ENST00000385265 94 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 MIR509-2-201ENST00000390724 91 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 MIR548AG1-201ENST00000579932 66 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 MIR3140-201ENST00000583685 90 ntBASIC-1.54□□□□□ -2.66
SHOX2O60902 AL442128.1-201ENST00000615151 90 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 318.3 ms