Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AC097510.1-201ENST00000510945 133 ntBASIC0.12□□□□□ -2.39
ITM2AO43736 IGLL4P-201ENST00000614590 133 ntBASIC0.12□□□□□ -2.39
ITM2AO43736 RNY1P1-201ENST00000364372 112 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 RNU6-382P-201ENST00000365181 106 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 RNU6-979P-201ENST00000383896 107 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 AL450471.1-201ENST00000447509 127 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 RNU7-24P-201ENST00000458867 62 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 RNU6-175P-201ENST00000516896 107 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 RNU6-1223P-201ENST00000517124 104 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 MIR5588-201ENST00000581890 63 ntBASIC0.11□□□□□ -2.39
ITM2AO43736 MIR494-201ENST00000349529 81 ntBASIC0.1□□□□□ -2.39
ITM2AO43736 Y_RNA.43-201ENST00000362670 111 ntBASIC0.1□□□□□ -2.39
ITM2AO43736 SNORD75.2-201ENST00000408784 58 ntBASIC0.1□□□□□ -2.39
ITM2AO43736 SCARNA17.3-201ENST00000516381 125 ntBASIC0.1□□□□□ -2.39
ITM2AO43736 RNU6-208P-201ENST00000362431 107 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 MIR582-201ENST00000365731 98 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 MIR145-201ENST00000384967 88 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 MIR450A2-201ENST00000385022 100 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 SNORA75.1-201ENST00000391130 148 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 RNU6-1108P-201ENST00000516308 104 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 AC062037.1-201ENST00000605302 128 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 U6.81-201ENST00000612550 106 ntBASIC0.09□□□□□ -2.4
ITM2AO43736 Y_RNA.164-201ENST00000363709 102 ntBASIC0.08□□□□□ -2.4
ITM2AO43736 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
ITM2AO43736 SNORD77.2-201ENST00000391045 68 ntBASIC0.08□□□□□ -2.4
ITM2AO43736 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.08□□□□□ -2.4
ITM2AO43736 Y_RNA.606-201ENST00000410579 103 ntBASIC0.08□□□□□ -2.4
ITM2AO43736 AC022137.1-201ENST00000483735 151 ntBASIC0.08□□□□□ -2.4
ITM2AO43736 SNORD114-5-201ENST00000362928 70 ntBASIC0.07□□□□□ -2.4
ITM2AO43736 RNU6-478P-201ENST00000363904 110 ntBASIC0.07□□□□□ -2.4
ITM2AO43736 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.07□□□□□ -2.4
ITM2AO43736 RNU6-180P-201ENST00000516697 61 ntBASIC0.07□□□□□ -2.4
ITM2AO43736 SNORA40.17-201ENST00000517256 115 ntBASIC0.07□□□□□ -2.4
ITM2AO43736 MIR4773-1-201ENST00000637203 78 ntBASIC0.07□□□□□ -2.4
ITM2AO43736 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
ITM2AO43736 SNORD73B-201ENST00000364394 72 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 SNORD114-29-201ENST00000364819 70 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 MIR548E-201ENST00000408287 88 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 RNU6-592P-201ENST00000411333 103 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 RNA5SP436-201ENST00000516020 115 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 RNU6-557P-201ENST00000516842 110 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 MIR6734-201ENST00000621166 68 ntBASIC0.06□□□□□ -2.4
ITM2AO43736 MIR20A-201ENST00000362279 71 ntBASIC0.05□□□□□ -2.4
ITM2AO43736 SNORD114-4-201ENST00000363962 75 ntBASIC0.05□□□□□ -2.4
ITM2AO43736 RNU6-990P-201ENST00000364385 104 ntBASIC0.05□□□□□ -2.4
ITM2AO43736 RNA5SP163-201ENST00000410304 99 ntBASIC0.05□□□□□ -2.4
ITM2AO43736 RNU7-171P-201ENST00000459581 62 ntBASIC0.05□□□□□ -2.4
ITM2AO43736 AC006254.2-201ENST00000603259 279 ntBASIC0.05□□□□□ -2.4
ITM2AO43736 RNU6-340P-201ENST00000364005 107 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 Y_RNA.371-201ENST00000365591 113 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 Y_RNA.426-201ENST00000384068 113 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 SNORA49-201ENST00000386157 136 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 Y_RNA.607-201ENST00000410597 98 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 AC244090.1-201ENST00000441884 93 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 RNU7-165P-201ENST00000458864 60 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 RNA5SP220-201ENST00000516298 104 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 MIR6514-201ENST00000622549 70 ntBASIC0.04□□□□□ -2.4
ITM2AO43736 Y_RNA.12-201ENST00000362393 112 ntBASIC0.03□□□□□ -2.4
ITM2AO43736 MIR499A-201ENST00000384903 122 ntBASIC0.03□□□□□ -2.4
ITM2AO43736 SNORA62.5-201ENST00000516634 120 ntBASIC0.03□□□□□ -2.4
ITM2AO43736 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
ITM2AO43736 Y_RNA.264-201ENST00000364665 102 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 RNU6-1039P-201ENST00000383931 107 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 RNU6-820P-201ENST00000384273 107 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 MIR106A-201ENST00000384870 81 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 RNU6-129P-201ENST00000391022 107 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 CR383656.4-201ENST00000546909 122 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
ITM2AO43736 MIRLET7A1-201ENST00000362295 80 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 Y_RNA.316-201ENST00000365118 111 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 RNU6-42P-201ENST00000384165 107 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 RNU6-1152P-201ENST00000384576 107 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 YWHAEP3-201ENST00000582767 121 ntBASIC0.01□□□□□ -2.41
ITM2AO43736 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
ITM2AO43736 RNU6-1276P-201ENST00000365372 104 ntBASIC0□□□□□ -2.41
ITM2AO43736 RNU6-1036P-201ENST00000383959 104 ntBASIC0□□□□□ -2.41
ITM2AO43736 RNU6-787P-201ENST00000384032 107 ntBASIC0□□□□□ -2.41
ITM2AO43736 Y_RNA.532-201ENST00000384590 113 ntBASIC0□□□□□ -2.41
ITM2AO43736 AC145423.2-201ENST00000610631 239 ntBASIC0□□□□□ -2.41
ITM2AO43736 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0□□□□□ -2.41
ITM2AO43736 MIR4679-1-201ENST00000637619 75 ntBASIC0□□□□□ -2.41
ITM2AO43736 SNORD114-23-201ENST00000363536 72 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 RNU6-686P-201ENST00000364839 107 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 RNU6-260P-201ENST00000384092 107 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 MIR203A-201ENST00000384836 110 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 RNU7-159P-201ENST00000459284 62 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 RNU6-274P-201ENST00000459566 107 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
ITM2AO43736 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.02□□□□□ -2.41
ITM2AO43736 RNY4P29-201ENST00000410801 97 ntBASIC-0.02□□□□□ -2.41
ITM2AO43736 AL691482.2-201ENST00000457453 84 ntBASIC-0.02□□□□□ -2.41
ITM2AO43736 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 341.3 ms