Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 MIR548C-201ENST00000384815 97 ntBASIC2.06□□□□□ -2.08
VGFO15240 RNA5SP484-201ENST00000458857 111 ntBASIC2.06□□□□□ -2.08
VGFO15240 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.06□□□□□ -2.08
VGFO15240 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
VGFO15240 MIR200A-201ENST00000384875 90 ntBASIC2.05□□□□□ -2.08
VGFO15240 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VGFO15240 MIR19B1-201ENST00000384829 87 ntBASIC2.04□□□□□ -2.08
VGFO15240 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VGFO15240 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.08
VGFO15240 SNORD124-201ENST00000459577 104 ntBASIC2.03□□□□□ -2.08
VGFO15240 AC025627.3-201ENST00000582078 182 ntBASIC2.03□□□□□ -2.08
VGFO15240 AL157398.1-201ENST00000452981 186 ntBASIC2.02□□□□□ -2.09
VGFO15240 snoU13.13-201ENST00000458842 104 ntBASIC2.02□□□□□ -2.09
VGFO15240 MIR521-2-201ENST00000384818 87 ntBASIC2□□□□□ -2.09
VGFO15240 AC021146.9-201ENST00000512503 156 ntBASIC2□□□□□ -2.09
VGFO15240 RNA5SP227-201ENST00000516184 113 ntBASIC2□□□□□ -2.09
VGFO15240 RNU6-92P-201ENST00000605893 104 ntBASIC2□□□□□ -2.09
VGFO15240 Y_RNA.224-201ENST00000364308 111 ntBASIC1.99□□□□□ -2.09
VGFO15240 Y_RNA.236-201ENST00000364427 111 ntBASIC1.99□□□□□ -2.09
VGFO15240 RNA5SP102-201ENST00000516865 106 ntBASIC1.98□□□□□ -2.09
VGFO15240 AL162376.1-201ENST00000624117 175 ntBASIC1.98□□□□□ -2.09
VGFO15240 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.95□□□□□ -2.1
VGFO15240 MIR320A-201ENST00000385302 82 ntBASIC1.95□□□□□ -2.1
VGFO15240 RNU6-122P-201ENST00000516818 107 ntBASIC1.95□□□□□ -2.1
VGFO15240 MIR3660-201ENST00000584845 100 ntBASIC1.95□□□□□ -2.1
VGFO15240 MIR6828-201ENST00000636181 60 ntBASIC1.95□□□□□ -2.1
VGFO15240 Y_RNA.407-201ENST00000383986 113 ntBASIC1.94□□□□□ -2.1
VGFO15240 MIR630-201ENST00000384957 97 ntBASIC1.94□□□□□ -2.1
VGFO15240 MIR758-201ENST00000390227 88 ntBASIC1.94□□□□□ -2.1
VGFO15240 MIR6078-201ENST00000611069 100 ntBASIC1.94□□□□□ -2.1
VGFO15240 SNORA15B-2-201ENST00000384058 135 ntBASIC1.93□□□□□ -2.1
VGFO15240 SNORA15B-1-201ENST00000384334 135 ntBASIC1.93□□□□□ -2.1
VGFO15240 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.93□□□□□ -2.1
VGFO15240 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.93□□□□□ -2.1
VGFO15240 SNORD114-24-201ENST00000365029 72 ntBASIC1.92□□□□□ -2.1
VGFO15240 AC006210.1-201ENST00000424882 111 ntBASIC1.92□□□□□ -2.1
VGFO15240 AC011195.1-201ENST00000578177 177 ntBASIC1.92□□□□□ -2.1
VGFO15240 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
VGFO15240 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
VGFO15240 SCARNA17.3-201ENST00000516381 125 ntBASIC1.91□□□□□ -2.1
VGFO15240 MIR3938-201ENST00000582157 103 ntBASIC1.91□□□□□ -2.1
VGFO15240 MIR4452-201ENST00000583004 71 ntBASIC1.91□□□□□ -2.1
VGFO15240 uc_338.10-201ENST00000621872 182 ntBASIC1.91□□□□□ -2.1
VGFO15240 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.91□□□□□ -2.1
VGFO15240 MIR18A-201ENST00000362310 71 ntBASIC1.9□□□□□ -2.11
VGFO15240 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VGFO15240 Y_RNA.540-201ENST00000384638 111 ntBASIC1.9□□□□□ -2.11
VGFO15240 MIR517B-201ENST00000385102 67 ntBASIC1.9□□□□□ -2.11
VGFO15240 SNORA75.1-201ENST00000391130 148 ntBASIC1.9□□□□□ -2.11
VGFO15240 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
VGFO15240 SNORA63.6-201ENST00000364921 119 ntBASIC1.89□□□□□ -2.11
VGFO15240 MIR652-201ENST00000385278 98 ntBASIC1.89□□□□□ -2.11
VGFO15240 SNORD113-2-201ENST00000391082 72 ntBASIC1.89□□□□□ -2.11
VGFO15240 SNORD99-201ENST00000408612 74 ntBASIC1.89□□□□□ -2.11
VGFO15240 RNA5SP268-201ENST00000516828 124 ntBASIC1.89□□□□□ -2.11
VGFO15240 MIR4473-201ENST00000583731 91 ntBASIC1.89□□□□□ -2.11
VGFO15240 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
VGFO15240 SNORD60.1-201ENST00000362451 73 ntBASIC1.88□□□□□ -2.11
VGFO15240 SNORD110-201ENST00000408189 75 ntBASIC1.88□□□□□ -2.11
VGFO15240 RNA5SP255-201ENST00000516370 107 ntBASIC1.88□□□□□ -2.11
VGFO15240 SNORA25.8-201ENST00000364831 128 ntBASIC1.87□□□□□ -2.11
VGFO15240 SNORA33.1-201ENST00000364957 130 ntBASIC1.87□□□□□ -2.11
VGFO15240 SNORD26-201ENST00000384147 75 ntBASIC1.87□□□□□ -2.11
VGFO15240 SNORD114-22-201ENST00000365423 72 ntBASIC1.86□□□□□ -2.11
VGFO15240 RNU4-45P-201ENST00000365469 141 ntBASIC1.86□□□□□ -2.11
VGFO15240 MIR150-201ENST00000385048 84 ntBASIC1.86□□□□□ -2.11
VGFO15240 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.86□□□□□ -2.11
VGFO15240 RNA5SP480-201ENST00000516840 109 ntBASIC1.86□□□□□ -2.11
VGFO15240 U2.7-201ENST00000619197 100 ntBASIC1.86□□□□□ -2.11
VGFO15240 RNU6-446P-201ENST00000362827 106 ntBASIC1.85□□□□□ -2.11
VGFO15240 SNORA36.1-201ENST00000363424 132 ntBASIC1.85□□□□□ -2.11
VGFO15240 RPS29P23-201ENST00000458635 123 ntBASIC1.85□□□□□ -2.11
VGFO15240 MIR96-201ENST00000362288 78 ntBASIC1.84□□□□□ -2.11
VGFO15240 RNU6-698P-201ENST00000363523 107 ntBASIC1.84□□□□□ -2.11
VGFO15240 RNU6-34P-201ENST00000364874 107 ntBASIC1.84□□□□□ -2.11
VGFO15240 RNU6-42P-201ENST00000384165 107 ntBASIC1.84□□□□□ -2.11
VGFO15240 MIR618-201ENST00000385287 98 ntBASIC1.84□□□□□ -2.11
VGFO15240 Y_RNA.633-201ENST00000459107 95 ntBASIC1.84□□□□□ -2.11
VGFO15240 RNA5SP404-201ENST00000517118 132 ntBASIC1.84□□□□□ -2.11
VGFO15240 MIR548AE1-201ENST00000583292 70 ntBASIC1.84□□□□□ -2.11
VGFO15240 Y_RNA.125-201ENST00000363371 111 ntBASIC1.83□□□□□ -2.12
VGFO15240 RNU7-174P-201ENST00000516248 59 ntBASIC1.83□□□□□ -2.12
VGFO15240 RNA5SP94-201ENST00000516917 108 ntBASIC1.82□□□□□ -2.12
VGFO15240 MIR26B-201ENST00000362251 77 ntBASIC1.81□□□□□ -2.12
VGFO15240 RNU1-124P-201ENST00000363861 145 ntBASIC1.81□□□□□ -2.12
VGFO15240 MIR7107-201ENST00000611489 80 ntBASIC1.81□□□□□ -2.12
VGFO15240 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
VGFO15240 RNU1-93P-201ENST00000364704 169 ntBASIC1.8□□□□□ -2.12
VGFO15240 RNA5SP220-201ENST00000516298 104 ntBASIC1.8□□□□□ -2.12
VGFO15240 RNA5SP61-201ENST00000516453 100 ntBASIC1.8□□□□□ -2.12
VGFO15240 Y_RNA.722-201ENST00000517279 114 ntBASIC1.8□□□□□ -2.12
VGFO15240 MIR582-201ENST00000365731 98 ntBASIC1.79□□□□□ -2.12
VGFO15240 MIR548E-201ENST00000408287 88 ntBASIC1.79□□□□□ -2.12
VGFO15240 MIR7974-201ENST00000615835 79 ntBASIC1.79□□□□□ -2.12
VGFO15240 RNA5SP222-201ENST00000411039 105 ntBASIC1.78□□□□□ -2.12
VGFO15240 RNU6-955P-201ENST00000410497 104 ntBASIC1.77□□□□□ -2.13
VGFO15240 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.77□□□□□ -2.13
VGFO15240 MIR7978-201ENST00000636158 59 ntBASIC1.77□□□□□ -2.13
VGFO15240 U4.4-201ENST00000620626 117 ntBASIC1.76□□□□□ -2.13
VGFO15240 MIR6734-201ENST00000621166 68 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms