Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MIR409-201ENST00000362237 79 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 MTCYBP6-201ENST00000441810 138 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 SNORA81.3-201ENST00000517283 198 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 AC103810.7-201ENST00000607821 91 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 AC091912.2-201ENST00000624798 167 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 MIR4320-201ENST00000636981 65 ntBASIC-1.66□□□□□ -2.68
SDCBPO00560 MIR519A2-201ENST00000384990 87 ntBASIC-1.67□□□□□ -2.68
SDCBPO00560 RNU6-644P-201ENST00000391155 98 ntBASIC-1.67□□□□□ -2.68
SDCBPO00560 AL158147.1-201ENST00000443970 75 ntBASIC-1.67□□□□□ -2.68
SDCBPO00560 SNORA18.5-201ENST00000516616 101 ntBASIC-1.67□□□□□ -2.68
SDCBPO00560 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.67□□□□□ -2.68
SDCBPO00560 AP002795.1-201ENST00000534879 84 ntBASIC-1.67□□□□□ -2.68
SDCBPO00560 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.67□□□□□ -2.68
SDCBPO00560 RNU4-32P-201ENST00000363404 141 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 MIR507-201ENST00000385234 94 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 HLA-S-202ENST00000425174 53 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 AL353691.2-201ENST00000443795 59 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 RNU7-154P-201ENST00000516194 62 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 RNU6-111P-201ENST00000517179 105 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 MIR548Z-201ENST00000584743 97 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 MIR6874-201ENST00000635894 71 ntBASIC-1.68□□□□□ -2.68
SDCBPO00560 RNY3P2-201ENST00000362918 102 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 MIR548I1-201ENST00000408810 149 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 MIR3128-201ENST00000581957 66 ntBASIC-1.69□□□□□ -2.68
SDCBPO00560 RNU6-80P-201ENST00000384195 107 ntBASIC-1.7□□□□□ -2.68
SDCBPO00560 AL035470.1-201ENST00000622571 220 ntBASIC-1.7□□□□□ -2.68
SDCBPO00560 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 RNU6-164P-201ENST00000364604 103 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 MIR521-2-201ENST00000384818 87 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 MTATP6P29-201ENST00000415057 132 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 MIR5591-201ENST00000578248 65 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 MIR548AG1-201ENST00000579932 66 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 MIR4520-1-201ENST00000582609 70 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 AC025166.1-201ENST00000612411 163 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 MIR6502-201ENST00000617296 76 ntBASIC-1.71□□□□□ -2.68
SDCBPO00560 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 RNU6-813P-201ENST00000384691 107 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 SNORD19-201ENST00000391191 68 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 RNU6-519P-201ENST00000410590 108 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 MTND3P2-201ENST00000438452 342 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 AL691482.2-201ENST00000457453 84 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 RNU6-732P-201ENST00000516033 103 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 RNU6-518P-201ENST00000516056 96 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 MIR4439-201ENST00000583746 80 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 AP001340.1-201ENST00000624405 217 ntBASIC-1.72□□□□□ -2.68
SDCBPO00560 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.73□□□□□ -2.69
SDCBPO00560 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.73□□□□□ -2.69
SDCBPO00560 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.73□□□□□ -2.69
SDCBPO00560 SNORA19.1-201ENST00000410656 129 ntBASIC-1.73□□□□□ -2.69
SDCBPO00560 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.73□□□□□ -2.69
SDCBPO00560 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 SNORD58C-201ENST00000365223 64 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 AL117187.1-201ENST00000555482 181 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.74□□□□□ -2.69
SDCBPO00560 RNU6-774P-201ENST00000363238 107 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 RNA5SP266-201ENST00000410273 108 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 RNU7-88P-201ENST00000458752 63 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 AC072026.1-201ENST00000605023 201 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 U6.81-201ENST00000612550 106 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 MIR6129-201ENST00000616087 109 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.75□□□□□ -2.69
SDCBPO00560 RNU5F-1-201ENST00000362507 117 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 SNORD45B-201ENST00000364617 72 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 RNU6-246P-201ENST00000384702 107 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 RPL35AP4-201ENST00000412007 102 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 U7.5-201ENST00000517224 61 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 MIR4770-201ENST00000579149 58 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 MIR5683-201ENST00000636514 76 ntBASIC-1.76□□□□□ -2.69
SDCBPO00560 AL078595.1-201ENST00000404458 226 ntBASIC-1.77□□□□□ -2.69
SDCBPO00560 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.77□□□□□ -2.69
SDCBPO00560 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.77□□□□□ -2.69
SDCBPO00560 MIR4777-201ENST00000583710 86 ntBASIC-1.77□□□□□ -2.69
SDCBPO00560 MIR6739-201ENST00000622461 75 ntBASIC-1.77□□□□□ -2.69
SDCBPO00560 MIR513C-201ENST00000401352 84 ntBASIC-1.78□□□□□ -2.69
SDCBPO00560 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.78□□□□□ -2.69
SDCBPO00560 RNU6-412P-201ENST00000516434 106 ntBASIC-1.78□□□□□ -2.69
SDCBPO00560 MIR4801-201ENST00000582704 82 ntBASIC-1.78□□□□□ -2.69
SDCBPO00560 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.79□□□□□ -2.7
SDCBPO00560 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.79□□□□□ -2.7
SDCBPO00560 AC090616.4-201ENST00000448026 115 ntBASIC-1.79□□□□□ -2.7
SDCBPO00560 MIR4679-2-201ENST00000578358 77 ntBASIC-1.79□□□□□ -2.7
SDCBPO00560 U7.2-201ENST00000607576 63 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms