Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNA5SP117-201ENST00000365294 118 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 Y_RNA.375-201ENST00000365625 101 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 snoU13.13-201ENST00000458842 104 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 RNU6-656P-201ENST00000516785 107 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 AC069503.3-201ENST00000618674 145 ntBASIC1.21□□□□□ -2.22
RFXAPO00287 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFXAPO00287 RNU6-260P-201ENST00000384092 107 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 SNORD105-201ENST00000386910 85 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 MT-TY-201ENST00000387409 66 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RFXAPO00287 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 RNU5B-6P-201ENST00000516765 68 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 AC018659.1-201ENST00000551083 169 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 MIR4639-201ENST00000584938 69 ntBASIC1.2□□□□□ -2.22
RFXAPO00287 RNU6-1079P-201ENST00000362861 110 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 Y_RNA.178-201ENST00000363832 102 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 RNA5SP192-201ENST00000364404 120 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 RNU6-269P-201ENST00000391077 97 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 MTND4LP1-201ENST00000446263 157 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 RNA5SP484-201ENST00000458857 111 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 RNA5SP47-201ENST00000517230 109 ntBASIC1.19□□□□□ -2.22
RFXAPO00287 RNU6-829P-201ENST00000363700 112 ntBASIC1.18□□□□□ -2.22
RFXAPO00287 SNORA75.1-201ENST00000391130 148 ntBASIC1.18□□□□□ -2.22
RFXAPO00287 MIR548L-201ENST00000408303 86 ntBASIC1.18□□□□□ -2.22
RFXAPO00287 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.18□□□□□ -2.22
RFXAPO00287 MIR4460-201ENST00000577862 86 ntBASIC1.18□□□□□ -2.22
RFXAPO00287 MIR3678-201ENST00000578455 94 ntBASIC1.18□□□□□ -2.22
RFXAPO00287 SNORA2.1-201ENST00000363089 137 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 RNU1-141P-201ENST00000364623 158 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 MIR216B-201ENST00000390186 82 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 RNA5SP299-201ENST00000391203 116 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 MIR3612-201ENST00000579753 87 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
RFXAPO00287 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
RFXAPO00287 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RFXAPO00287 U7.7-201ENST00000459276 60 ntBASIC1.16□□□□□ -2.22
RFXAPO00287 SCARNA21.1-201ENST00000515996 128 ntBASIC1.16□□□□□ -2.22
RFXAPO00287 RNU6-1110P-201ENST00000516462 101 ntBASIC1.16□□□□□ -2.22
RFXAPO00287 CYP3A137P-201ENST00000562436 69 ntBASIC1.16□□□□□ -2.22
RFXAPO00287 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
RFXAPO00287 AL157398.1-201ENST00000452981 186 ntBASIC1.15□□□□□ -2.23
RFXAPO00287 RNU6-469P-201ENST00000516253 101 ntBASIC1.15□□□□□ -2.23
RFXAPO00287 MIR548V-201ENST00000584165 80 ntBASIC1.15□□□□□ -2.23
RFXAPO00287 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
RFXAPO00287 SNORA25.5-201ENST00000363782 126 ntBASIC1.14□□□□□ -2.23
RFXAPO00287 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
RFXAPO00287 RNU6-542P-201ENST00000516405 103 ntBASIC1.14□□□□□ -2.23
RFXAPO00287 MIR548AE1-201ENST00000583292 70 ntBASIC1.14□□□□□ -2.23
RFXAPO00287 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
RFXAPO00287 RNU6-446P-201ENST00000362827 106 ntBASIC1.13□□□□□ -2.23
RFXAPO00287 SNORA36.1-201ENST00000363424 132 ntBASIC1.13□□□□□ -2.23
RFXAPO00287 MIR466-201ENST00000580653 84 ntBASIC1.13□□□□□ -2.23
RFXAPO00287 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.13□□□□□ -2.23
RFXAPO00287 Y_RNA.236-201ENST00000364427 111 ntBASIC1.12□□□□□ -2.23
RFXAPO00287 MIR582-201ENST00000365731 98 ntBASIC1.12□□□□□ -2.23
RFXAPO00287 RNU6-1089P-201ENST00000516473 104 ntBASIC1.12□□□□□ -2.23
RFXAPO00287 SCARNA16.5-201ENST00000517114 183 ntBASIC1.12□□□□□ -2.23
RFXAPO00287 MIR6739-201ENST00000622461 75 ntBASIC1.12□□□□□ -2.23
RFXAPO00287 RNU7-74P-201ENST00000459104 62 ntBASIC1.11□□□□□ -2.23
RFXAPO00287 RNU6-135P-201ENST00000516769 101 ntBASIC1.11□□□□□ -2.23
RFXAPO00287 RNU6-614P-201ENST00000384369 107 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 MIR193B-201ENST00000384907 83 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 RNU6-141P-201ENST00000410499 105 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 MIR4473-201ENST00000583731 91 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 U6.59-201ENST00000615686 107 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 AL162376.1-201ENST00000624117 175 ntBASIC1.1□□□□□ -2.23
RFXAPO00287 SNORD113-4-201ENST00000364802 75 ntBASIC1.09□□□□□ -2.23
RFXAPO00287 RNY1P8-201ENST00000383970 114 ntBASIC1.09□□□□□ -2.23
RFXAPO00287 MIR630-201ENST00000384957 97 ntBASIC1.09□□□□□ -2.23
RFXAPO00287 SNORA33.1-201ENST00000364957 130 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 SNORA8.2-201ENST00000384372 139 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 MIR548C-201ENST00000384815 97 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 FABP5P4-201ENST00000437203 171 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 AC021146.9-201ENST00000512503 156 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 MIR1273G-201ENST00000577677 100 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 MIR4752-201ENST00000579672 72 ntBASIC1.08□□□□□ -2.24
RFXAPO00287 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RFXAPO00287 MIR18A-201ENST00000362310 71 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 MIR652-201ENST00000385278 98 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 SNORD99-201ENST00000408612 74 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 MIR7107-201ENST00000611489 80 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 SNORA70.25-201ENST00000612741 95 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 MIR6828-201ENST00000636181 60 ntBASIC1.07□□□□□ -2.24
RFXAPO00287 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
RFXAPO00287 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
RFXAPO00287 RNA5SP227-201ENST00000516184 113 ntBASIC1.06□□□□□ -2.24
RFXAPO00287 SNORD60.1-201ENST00000362451 73 ntBASIC1.05□□□□□ -2.24
RFXAPO00287 Y_RNA.115-201ENST00000363272 98 ntBASIC1.05□□□□□ -2.24
RFXAPO00287 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
RFXAPO00287 MIR548E-201ENST00000408287 88 ntBASIC1.05□□□□□ -2.24
RFXAPO00287 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 302.7 ms