Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 RNU4-32P-201ENST00000363404 141 ntBASIC-1.27□□□□□ -2.61
IGHV3-43A0A0B4J1X8 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.27□□□□□ -2.61
IGHV3-43A0A0B4J1X8 SNORA24B-201ENST00000384176 131 ntBASIC-1.27□□□□□ -2.61
IGHV3-43A0A0B4J1X8 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.27□□□□□ -2.61
IGHV3-43A0A0B4J1X8 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.27□□□□□ -2.61
IGHV3-43A0A0B4J1X8 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.27□□□□□ -2.61
IGHV3-43A0A0B4J1X8 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.28□□□□□ -2.61
IGHV3-43A0A0B4J1X8 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.28□□□□□ -2.61
IGHV3-43A0A0B4J1X8 MIR548A1-201ENST00000385041 97 ntBASIC-1.28□□□□□ -2.61
IGHV3-43A0A0B4J1X8 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.28□□□□□ -2.61
IGHV3-43A0A0B4J1X8 MIR4439-201ENST00000583746 80 ntBASIC-1.28□□□□□ -2.61
IGHV3-43A0A0B4J1X8 AL353803.5-201ENST00000599815 141 ntBASIC-1.28□□□□□ -2.61
IGHV3-43A0A0B4J1X8 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.29□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-644P-201ENST00000391155 98 ntBASIC-1.29□□□□□ -2.62
IGHV3-43A0A0B4J1X8 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-327P-201ENST00000516270 127 ntBASIC-1.29□□□□□ -2.62
IGHV3-43A0A0B4J1X8 AL035470.1-201ENST00000622571 220 ntBASIC-1.29□□□□□ -2.62
IGHV3-43A0A0B4J1X8 AC090617.8-201ENST00000623339 167 ntBASIC-1.29□□□□□ -2.62
IGHV3-43A0A0B4J1X8 SNORD45B-201ENST00000364617 72 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 SNORD4B-201ENST00000459083 72 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR4306-201ENST00000583390 91 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR548Z-201ENST00000584743 97 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 AC103810.7-201ENST00000607821 91 ntBASIC-1.3□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MTND3P2-201ENST00000438452 342 ntBASIC-1.31□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR3613-201ENST00000579844 87 ntBASIC-1.31□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR4464-201ENST00000580818 92 ntBASIC-1.31□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR4503-201ENST00000582187 83 ntBASIC-1.31□□□□□ -2.62
IGHV3-43A0A0B4J1X8 AC006254.2-201ENST00000603259 279 ntBASIC-1.31□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-196P-201ENST00000384315 107 ntBASIC-1.32□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-813P-201ENST00000384691 107 ntBASIC-1.32□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-519P-201ENST00000410590 108 ntBASIC-1.32□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-62P-201ENST00000516526 102 ntBASIC-1.32□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR4679-2-201ENST00000578358 77 ntBASIC-1.32□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR4320-201ENST00000636981 65 ntBASIC-1.32□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.33□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.33□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR569-201ENST00000385228 96 ntBASIC-1.33□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNA5SP292-201ENST00000390974 118 ntBASIC-1.33□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MTATP6P29-201ENST00000415057 132 ntBASIC-1.33□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-200P-201ENST00000364743 107 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-382P-201ENST00000365181 106 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-394P-201ENST00000410735 107 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 snoU13.17-201ENST00000458802 104 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNA5SP147-201ENST00000516493 109 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 AL445584.3-201ENST00000617173 78 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 MIR6888-201ENST00000621977 67 ntBASIC-1.34□□□□□ -2.62
IGHV3-43A0A0B4J1X8 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.35□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-260P-201ENST00000384092 107 ntBASIC-1.35□□□□□ -2.63
IGHV3-43A0A0B4J1X8 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.35□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-574P-201ENST00000384265 107 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-804P-201ENST00000384286 107 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 SNORD90-201ENST00000391145 111 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR548I1-201ENST00000408810 149 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-772P-201ENST00000516042 105 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 SNORA18.5-201ENST00000516616 101 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR4773-1-201ENST00000637203 78 ntBASIC-1.36□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU5F-1-201ENST00000362507 117 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 SNORA33.1-201ENST00000364957 130 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR203A-201ENST00000384836 110 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR1255B2-201ENST00000408618 67 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNA5SP272-201ENST00000516095 111 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR6509-201ENST00000614603 85 ntBASIC-1.37□□□□□ -2.63
IGHV3-43A0A0B4J1X8 AL157777.2-201ENST00000258070 137 ntBASIC-1.38□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.38□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.38□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNA5SP461-201ENST00000516451 104 ntBASIC-1.38□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR3144-201ENST00000579460 79 ntBASIC-1.38□□□□□ -2.63
IGHV3-43A0A0B4J1X8 AC004792.1-201ENST00000614523 137 ntBASIC-1.38□□□□□ -2.63
IGHV3-43A0A0B4J1X8 SNORA2.1-201ENST00000363089 137 ntBASIC-1.39□□□□□ -2.63
IGHV3-43A0A0B4J1X8 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.39□□□□□ -2.63
IGHV3-43A0A0B4J1X8 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.39□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-706P-201ENST00000517229 104 ntBASIC-1.39□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR5009-201ENST00000578736 100 ntBASIC-1.39□□□□□ -2.63
IGHV3-43A0A0B4J1X8 MIR409-201ENST00000362237 79 ntBASIC-1.4□□□□□ -2.63
IGHV3-43A0A0B4J1X8 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.4□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-924P-201ENST00000362926 108 ntBASIC-1.4□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-426P-201ENST00000516464 97 ntBASIC-1.4□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNA5SP476-201ENST00000516613 103 ntBASIC-1.4□□□□□ -2.63
IGHV3-43A0A0B4J1X8 RNU6-824P-201ENST00000363724 104 ntBASIC-1.41□□□□□ -2.64
IGHV3-43A0A0B4J1X8 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.41□□□□□ -2.64
IGHV3-43A0A0B4J1X8 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.41□□□□□ -2.64
IGHV3-43A0A0B4J1X8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.41□□□□□ -2.64
IGHV3-43A0A0B4J1X8 MIR3657-201ENST00000584818 117 ntBASIC-1.41□□□□□ -2.64
IGHV3-43A0A0B4J1X8 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.42□□□□□ -2.64
IGHV3-43A0A0B4J1X8 AL691482.2-201ENST00000457453 84 ntBASIC-1.42□□□□□ -2.64
IGHV3-43A0A0B4J1X8 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.42□□□□□ -2.64
IGHV3-43A0A0B4J1X8 CYP3A54P-201ENST00000566950 75 ntBASIC-1.42□□□□□ -2.64
IGHV3-43A0A0B4J1X8 MIR4777-201ENST00000583710 86 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 6.8 ms