Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
PCDHGA9Q9Y5G4 Y_RNA.677-201ENST00000516401 85 ntBASIC0.36□□□□□ -2.35
PCDHGA9Q9Y5G4 MIR548AG2-201ENST00000581228 64 ntBASIC0.36□□□□□ -2.35
PCDHGA9Q9Y5G4 MIR760-201ENST00000390220 80 ntBASIC0.35□□□□□ -2.35
PCDHGA9Q9Y5G4 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
PCDHGA9Q9Y5G4 AC069503.3-201ENST00000618674 145 ntBASIC0.35□□□□□ -2.35
PCDHGA9Q9Y5G4 MIR6755-201ENST00000619993 66 ntBASIC0.35□□□□□ -2.35
PCDHGA9Q9Y5G4 RNA5SP128-201ENST00000365305 116 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU6-811P-201ENST00000384069 107 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 NAMPTP3-201ENST00000569273 224 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR4460-201ENST00000577862 86 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR4752-201ENST00000579672 72 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR4315-1-201ENST00000636800 73 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR4315-2-201ENST00000640925 73 ntBASIC0.34□□□□□ -2.36
PCDHGA9Q9Y5G4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.33□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU6-153P-201ENST00000364422 104 ntBASIC0.33□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.348-201ENST00000365403 103 ntBASIC0.33□□□□□ -2.36
PCDHGA9Q9Y5G4 AC093423.1-201ENST00000440817 142 ntBASIC0.33□□□□□ -2.36
PCDHGA9Q9Y5G4 RNA5SP484-201ENST00000458857 111 ntBASIC0.33□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU6-168P-201ENST00000516189 101 ntBASIC0.32□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU6-162P-201ENST00000516228 103 ntBASIC0.32□□□□□ -2.36
PCDHGA9Q9Y5G4 RNA5SP63-201ENST00000391225 112 ntBASIC0.31□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.290-201ENST00000364879 114 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 RNY4P3-201ENST00000365254 95 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU6-652P-201ENST00000365488 107 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.609-201ENST00000410669 89 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 AC104996.3-201ENST00000590718 94 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 SNORA70.25-201ENST00000612741 95 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR2909-201ENST00000617113 69 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 MALAT1.1-201ENST00000618249 95 ntBASIC0.3□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.220-201ENST00000364244 109 ntBASIC0.29□□□□□ -2.36
PCDHGA9Q9Y5G4 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
PCDHGA9Q9Y5G4 MT-TY-201ENST00000387409 66 ntBASIC0.29□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR3064-201ENST00000581130 66 ntBASIC0.29□□□□□ -2.36
PCDHGA9Q9Y5G4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.29□□□□□ -2.36
PCDHGA9Q9Y5G4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.28□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.190-201ENST00000363964 101 ntBASIC0.28□□□□□ -2.36
PCDHGA9Q9Y5G4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.28□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR451A-201ENST00000385059 72 ntBASIC0.28□□□□□ -2.36
PCDHGA9Q9Y5G4 MIR1236-201ENST00000408340 102 ntBASIC0.28□□□□□ -2.36
PCDHGA9Q9Y5G4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU7-129P-201ENST00000516128 62 ntBASIC0.27□□□□□ -2.37
PCDHGA9Q9Y5G4 AC026421.1-201ENST00000519101 163 ntBASIC0.27□□□□□ -2.37
PCDHGA9Q9Y5G4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
PCDHGA9Q9Y5G4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.26□□□□□ -2.37
PCDHGA9Q9Y5G4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.26□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU6-905P-201ENST00000384434 107 ntBASIC0.26□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR892B-201ENST00000401279 77 ntBASIC0.26□□□□□ -2.37
PCDHGA9Q9Y5G4 MTATP6P29-201ENST00000415057 132 ntBASIC0.26□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR548AD-201ENST00000584780 82 ntBASIC0.26□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU6-132P-201ENST00000383863 107 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 SNORD116-22-201ENST00000384430 92 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 RNA5SP89-201ENST00000410300 108 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 SNORA25.13-201ENST00000516395 103 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 YWHAEP2-201ENST00000580066 112 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 uc_338.10-201ENST00000621872 182 ntBASIC0.25□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU4-32P-201ENST00000363404 141 ntBASIC0.24□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU6-640P-201ENST00000363693 105 ntBASIC0.24□□□□□ -2.37
PCDHGA9Q9Y5G4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.24□□□□□ -2.37
PCDHGA9Q9Y5G4 Y_RNA.694-201ENST00000516677 117 ntBASIC0.24□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR548O2-201ENST00000616090 70 ntBASIC0.24□□□□□ -2.37
PCDHGA9Q9Y5G4 SNORA63.2-201ENST00000362603 126 ntBASIC0.23□□□□□ -2.37
PCDHGA9Q9Y5G4 RNU6-782P-201ENST00000516852 104 ntBASIC0.23□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR610-201ENST00000385139 96 ntBASIC0.22□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR501-201ENST00000390204 84 ntBASIC0.22□□□□□ -2.37
PCDHGA9Q9Y5G4 SNORA18.5-201ENST00000516616 101 ntBASIC0.22□□□□□ -2.37
PCDHGA9Q9Y5G4 MIR4743-201ENST00000584576 69 ntBASIC0.22□□□□□ -2.37
PCDHGA9Q9Y5G4 SNORA42.1-201ENST00000363515 137 ntBASIC0.21□□□□□ -2.38
PCDHGA9Q9Y5G4 MIR4677-201ENST00000584153 80 ntBASIC0.21□□□□□ -2.38
PCDHGA9Q9Y5G4 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
PCDHGA9Q9Y5G4 MIR499B-201ENST00000636498 73 ntBASIC0.21□□□□□ -2.38
PCDHGA9Q9Y5G4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.2□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
PCDHGA9Q9Y5G4 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
PCDHGA9Q9Y5G4 FGF7P7-201ENST00000514120 227 ntBASIC0.2□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.2□□□□□ -2.38
PCDHGA9Q9Y5G4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
PCDHGA9Q9Y5G4 SNORD114-4-201ENST00000363962 75 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU6-1051P-201ENST00000365471 102 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 MIR519C-201ENST00000385053 87 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 SNORA75.1-201ENST00000391130 148 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 RNA5SP299-201ENST00000391203 116 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 MIR4668-201ENST00000582284 70 ntBASIC0.19□□□□□ -2.38
PCDHGA9Q9Y5G4 SNORD115-37-201ENST00000363768 82 ntBASIC0.18□□□□□ -2.38
PCDHGA9Q9Y5G4 RNA5SP395-201ENST00000516567 118 ntBASIC0.18□□□□□ -2.38
PCDHGA9Q9Y5G4 AC084368.1-201ENST00000620935 65 ntBASIC0.18□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU6-633P-201ENST00000362612 103 ntBASIC0.17□□□□□ -2.38
PCDHGA9Q9Y5G4 RNA5SP292-201ENST00000390974 118 ntBASIC0.17□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU5F-1-201ENST00000362507 117 ntBASIC0.16□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU6V-201ENST00000384105 107 ntBASIC0.16□□□□□ -2.38
PCDHGA9Q9Y5G4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.16□□□□□ -2.38
PCDHGA9Q9Y5G4 MIR4796-201ENST00000580742 81 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms