Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 MIR1285-2-201ENST00000408311 88 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 AC244250.2-201ENST00000418731 148 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 MIR548AG2-201ENST00000581228 64 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 RNU6-524P-201ENST00000384270 107 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 RNU6-616P-201ENST00000384353 107 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 AC025521.1-201ENST00000621624 286 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 MIR4320-201ENST00000636981 65 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 SNORD114-29-201ENST00000364819 70 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 RNU6-971P-201ENST00000516920 106 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 MIR4473-201ENST00000583731 91 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 MIR4263-201ENST00000584745 83 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 AL391099.1-201ENST00000624635 187 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 RNU6-811P-201ENST00000384069 107 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 AL158147.1-201ENST00000443970 75 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 MIR3613-201ENST00000579844 87 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 MIR4439-201ENST00000583746 80 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-746P-201ENST00000384112 109 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-959P-201ENST00000384671 107 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 MTATP6P29-201ENST00000415057 132 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 SNORD116-10-201ENST00000363791 102 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 MIR548A3-201ENST00000385297 97 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 AL161932.1-201ENST00000437408 146 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 SPINT5P-201ENST00000448174 155 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNA5SP484-201ENST00000458857 111 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-65P-201ENST00000516332 98 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-62P-201ENST00000516526 102 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 MIR4752-201ENST00000579672 72 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 AC096531.1-201ENST00000419107 107 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 RNU7-106P-201ENST00000459514 67 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR4436A-201ENST00000585278 85 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR196A2-201ENST00000385189 110 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 RNU6-972P-201ENST00000391208 107 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR548M-201ENST00000408260 86 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR4696-201ENST00000581431 70 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 MIR451A-201ENST00000385059 72 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 MIR2113-201ENST00000459007 91 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 RNU6-75P-201ENST00000515944 104 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 TRDV1-202ENST00000621643 102 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 SNORA63.2-201ENST00000362603 126 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 RNU6-10P-201ENST00000384036 107 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 AC008267.6-201ENST00000441664 139 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 RNU7-61P-201ENST00000515897 61 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR4460-201ENST00000577862 86 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 RNU7-24P-201ENST00000458867 62 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR3681-201ENST00000580089 72 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR3668-201ENST00000582138 75 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR2052-201ENST00000636055 55 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RNA5SP275-201ENST00000363936 118 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RNU6-907P-201ENST00000390924 102 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RN7SL660P-201ENST00000614852 299 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 YWHAEP2-201ENST00000580066 112 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 SNORD56B-201ENST00000384713 71 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 MIR587-201ENST00000384845 96 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 MIR4694-201ENST00000578534 80 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 SNORA7.5-201ENST00000410672 110 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 MIR548AZ-201ENST00000616567 95 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 SNORA49-201ENST00000386157 136 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 RNU6-346P-201ENST00000516288 111 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 AC068339.1-201ENST00000526965 141 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms