Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.98□□□□□ -2.57
LRRC42Q9Y546 U7.2-201ENST00000607576 63 ntBASIC-0.98□□□□□ -2.57
LRRC42Q9Y546 SNORA63.6-201ENST00000364921 119 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 SNORD50.2-201ENST00000365465 70 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 RNU6-431P-201ENST00000383874 107 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 RNY1P7-201ENST00000384743 110 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 MIR577-201ENST00000385196 96 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 MTND3P2-201ENST00000438452 342 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 FGF7P7-201ENST00000514120 227 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 RNU6-65P-201ENST00000516332 98 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.99□□□□□ -2.57
LRRC42Q9Y546 Y_RNA.163-201ENST00000363702 113 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 RNU6-990P-201ENST00000364385 104 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 SNORD74.6-201ENST00000364796 70 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 RNU6-132P-201ENST00000383863 107 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 RNU6-574P-201ENST00000384265 107 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 MIR224-201ENST00000384889 81 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 RNU6-1045P-201ENST00000516321 107 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 MIR548X2-201ENST00000579776 100 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 MIR3681-201ENST00000580089 72 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 MIR4536-1-201ENST00000583537 88 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 AC025166.1-201ENST00000612411 163 ntBASIC-1□□□□□ -2.57
LRRC42Q9Y546 SNORD58C-201ENST00000365223 64 ntBASIC-1.01□□□□□ -2.57
LRRC42Q9Y546 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.01□□□□□ -2.57
LRRC42Q9Y546 SNORD64-201ENST00000386683 67 ntBASIC-1.01□□□□□ -2.57
LRRC42Q9Y546 SNORD83B-201ENST00000386745 93 ntBASIC-1.01□□□□□ -2.57
LRRC42Q9Y546 MIR4636-201ENST00000582271 80 ntBASIC-1.01□□□□□ -2.57
LRRC42Q9Y546 MIR3140-201ENST00000583685 90 ntBASIC-1.01□□□□□ -2.57
LRRC42Q9Y546 RNU6-495P-201ENST00000362995 107 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 RNU6-200P-201ENST00000364743 107 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 SNORA24B-201ENST00000384176 131 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 MIR147A-201ENST00000385079 72 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 RNU6-138P-201ENST00000515952 107 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 MIR4694-201ENST00000578534 80 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 AC090617.8-201ENST00000623339 167 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 snoR1.1-201ENST00000628177 80 ntBASIC-1.02□□□□□ -2.57
LRRC42Q9Y546 MT-TQ-201ENST00000387372 72 ntBASIC-1.03□□□□□ -2.57
LRRC42Q9Y546 RNU6-394P-201ENST00000410735 107 ntBASIC-1.03□□□□□ -2.57
LRRC42Q9Y546 AL513043.2-201ENST00000573941 143 ntBASIC-1.03□□□□□ -2.57
LRRC42Q9Y546 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.03□□□□□ -2.57
LRRC42Q9Y546 MIR569-201ENST00000385228 96 ntBASIC-1.04□□□□□ -2.58
LRRC42Q9Y546 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.04□□□□□ -2.58
LRRC42Q9Y546 MIR4464-201ENST00000580818 92 ntBASIC-1.04□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 SNORA63.2-201ENST00000362603 126 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 RNU6-832P-201ENST00000363319 107 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 MIR4499-201ENST00000584834 69 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 uc_338.19-201ENST00000616808 99 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 MIR382-201ENST00000637119 76 ntBASIC-1.05□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 MIR124-2-201ENST00000385081 109 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 SNORD18.2-201ENST00000459604 70 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 MIR3613-201ENST00000579844 87 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 MIR3064-201ENST00000581130 66 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 AL035470.1-201ENST00000622571 220 ntBASIC-1.06□□□□□ -2.58
LRRC42Q9Y546 RNY3P2-201ENST00000362918 102 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 RNU6-804P-201ENST00000384286 107 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 AC021146.9-201ENST00000512503 156 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 RNU6-758P-201ENST00000516292 89 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 AC108676.2-201ENST00000605225 163 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 AC004792.1-201ENST00000614523 137 ntBASIC-1.07□□□□□ -2.58
LRRC42Q9Y546 SNORD114-17-201ENST00000364699 75 ntBASIC-1.08□□□□□ -2.58
LRRC42Q9Y546 SNORD90-201ENST00000391145 111 ntBASIC-1.08□□□□□ -2.58
LRRC42Q9Y546 SCARNA18B-201ENST00000458806 135 ntBASIC-1.08□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.08□□□□□ -2.58
LRRC42Q9Y546 AC140658.3-201ENST00000567603 271 ntBASIC-1.08□□□□□ -2.58
LRRC42Q9Y546 YWHAEP3-201ENST00000582767 121 ntBASIC-1.08□□□□□ -2.58
LRRC42Q9Y546 RNU6-379P-201ENST00000363813 104 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 RNU6-694P-201ENST00000364071 147 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 RNU6-463P-201ENST00000384340 107 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 MIR548U-201ENST00000390728 81 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 Z95118.1-201ENST00000421372 247 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 MIR4679-2-201ENST00000578358 77 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 MIR3144-201ENST00000579460 79 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 MIR4439-201ENST00000583746 80 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 AC104996.3-201ENST00000590718 94 ntBASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.09□□□□□ -2.58
LRRC42Q9Y546 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 SNORD75.2-201ENST00000408784 58 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 RNU4-63P-201ENST00000411313 118 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 RNA5SP272-201ENST00000516095 111 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms