Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 RNU4-45P-201ENST00000365469 141 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 MIR617-201ENST00000385030 97 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 RNU2-59P-201ENST00000410482 191 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 RNU6-303P-201ENST00000517091 106 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 RNA5SP47-201ENST00000517230 109 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 U7.4-201ENST00000614961 63 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 AC244669.1-204ENST00000621564 178 ntBASIC1.09□□□□□ -2.23
SIT1Q9Y3P8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 Y_RNA.606-201ENST00000410579 103 ntBASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 AC074348.1-201ENST00000426503 132 ntBASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 RNU7-104P-201ENST00000459398 79 ntBASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 RNU6-807P-201ENST00000516805 107 ntBASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 MIR3678-201ENST00000578455 94 ntBASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 MIR3140-201ENST00000583685 90 ntBASIC1.08□□□□□ -2.24
SIT1Q9Y3P8 RNU6-1229P-201ENST00000364295 107 ntBASIC1.07□□□□□ -2.24
SIT1Q9Y3P8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SIT1Q9Y3P8 RNU7-74P-201ENST00000459104 62 ntBASIC1.07□□□□□ -2.24
SIT1Q9Y3P8 AC097510.1-201ENST00000510945 133 ntBASIC1.07□□□□□ -2.24
SIT1Q9Y3P8 CYP3A137P-201ENST00000562436 69 ntBASIC1.07□□□□□ -2.24
SIT1Q9Y3P8 MIR7974-201ENST00000615835 79 ntBASIC1.07□□□□□ -2.24
SIT1Q9Y3P8 Y_RNA.532-201ENST00000384590 113 ntBASIC1.06□□□□□ -2.24
SIT1Q9Y3P8 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
SIT1Q9Y3P8 Y_RNA.12-201ENST00000362393 112 ntBASIC1.05□□□□□ -2.24
SIT1Q9Y3P8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SIT1Q9Y3P8 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
SIT1Q9Y3P8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.05□□□□□ -2.24
SIT1Q9Y3P8 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
SIT1Q9Y3P8 MIR6828-201ENST00000636181 60 ntBASIC1.05□□□□□ -2.24
SIT1Q9Y3P8 RNU6-340P-201ENST00000364005 107 ntBASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 RNU6-726P-201ENST00000364680 107 ntBASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 MIR519E-201ENST00000385075 84 ntBASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 SNORD99-201ENST00000408612 74 ntBASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 U6.81-201ENST00000612550 106 ntBASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.04□□□□□ -2.24
SIT1Q9Y3P8 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
SIT1Q9Y3P8 RNU6-681P-201ENST00000364012 104 ntBASIC1.03□□□□□ -2.24
SIT1Q9Y3P8 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
SIT1Q9Y3P8 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 RNU6-1177P-201ENST00000391058 104 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 AC093423.1-201ENST00000440817 142 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 SCARNA18B-201ENST00000458806 135 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
SIT1Q9Y3P8 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
SIT1Q9Y3P8 RNU6-1052P-201ENST00000411398 104 ntBASIC1.01□□□□□ -2.25
SIT1Q9Y3P8 RNU6-719P-201ENST00000516671 104 ntBASIC1.01□□□□□ -2.25
SIT1Q9Y3P8 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
SIT1Q9Y3P8 MIR548O2-201ENST00000616090 70 ntBASIC1.01□□□□□ -2.25
SIT1Q9Y3P8 Y_RNA.30-201ENST00000362572 97 ntBASIC1□□□□□ -2.25
SIT1Q9Y3P8 RNU6-824P-201ENST00000363724 104 ntBASIC1□□□□□ -2.25
SIT1Q9Y3P8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
SIT1Q9Y3P8 NEAT1_2.1-201ENST00000620525 105 ntBASIC1□□□□□ -2.25
SIT1Q9Y3P8 Y_RNA.788-201ENST00000622394 112 ntBASIC1□□□□□ -2.25
SIT1Q9Y3P8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
SIT1Q9Y3P8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
SIT1Q9Y3P8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SIT1Q9Y3P8 Y_RNA.545-201ENST00000384652 105 ntBASIC0.99□□□□□ -2.25
SIT1Q9Y3P8 RNU7-24P-201ENST00000458867 62 ntBASIC0.99□□□□□ -2.25
SIT1Q9Y3P8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.99□□□□□ -2.25
SIT1Q9Y3P8 MIR193B-201ENST00000384907 83 ntBASIC0.98□□□□□ -2.25
SIT1Q9Y3P8 Y_RNA.371-201ENST00000365591 113 ntBASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 SNORA8.2-201ENST00000384372 139 ntBASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 MIR548L-201ENST00000408303 86 ntBASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 RNU6-523P-201ENST00000516304 54 ntBASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 MIR1273G-201ENST00000577677 100 ntBASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 AL162376.1-201ENST00000624117 175 ntBASIC0.97□□□□□ -2.25
SIT1Q9Y3P8 RNU6-154P-201ENST00000384306 106 ntBASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 RNU6-411P-201ENST00000384451 107 ntBASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 MIR889-201ENST00000401280 79 ntBASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 RNU6-752P-201ENST00000516376 102 ntBASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 MIR3134-201ENST00000579433 74 ntBASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SIT1Q9Y3P8 RNU6-495P-201ENST00000362995 107 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 SNORA36.1-201ENST00000363424 132 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 SNORD75.2-201ENST00000408784 58 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 OR2A41P-201ENST00000473586 105 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 RNA5SP94-201ENST00000516917 108 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 MIR4484-201ENST00000582855 83 ntBASIC0.95□□□□□ -2.26
SIT1Q9Y3P8 MT-TY-201ENST00000387409 66 ntBASIC0.94□□□□□ -2.26
SIT1Q9Y3P8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.94□□□□□ -2.26
SIT1Q9Y3P8 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
SIT1Q9Y3P8 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
SIT1Q9Y3P8 RNU1-141P-201ENST00000364623 158 ntBASIC0.93□□□□□ -2.26
SIT1Q9Y3P8 RNU6-716P-201ENST00000365621 103 ntBASIC0.93□□□□□ -2.26
SIT1Q9Y3P8 RNU6-269P-201ENST00000391077 97 ntBASIC0.93□□□□□ -2.26
SIT1Q9Y3P8 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
SIT1Q9Y3P8 RNA5SP457-201ENST00000363657 124 ntBASIC0.92□□□□□ -2.26
SIT1Q9Y3P8 RNU6-382P-201ENST00000365181 106 ntBASIC0.92□□□□□ -2.26
SIT1Q9Y3P8 Y_RNA.565-201ENST00000384719 101 ntBASIC0.92□□□□□ -2.26
SIT1Q9Y3P8 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
SIT1Q9Y3P8 AC073261.1-201ENST00000429409 121 ntBASIC0.92□□□□□ -2.26
SIT1Q9Y3P8 RNU6-274P-201ENST00000459566 107 ntBASIC0.92□□□□□ -2.26
SIT1Q9Y3P8 RNU6-70P-201ENST00000516438 60 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms