Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR4676-201ENST00000583078 72 ntBASIC2.25□□□□□ -2.05
PDZRN3Q9UPQ7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDZRN3Q9UPQ7 Y_RNA.246-201ENST00000364495 108 ntBASIC2.24□□□□□ -2.05
PDZRN3Q9UPQ7 RNU6-1246P-201ENST00000391064 107 ntBASIC2.24□□□□□ -2.05
PDZRN3Q9UPQ7 SNORA31.14-201ENST00000516728 116 ntBASIC2.24□□□□□ -2.05
PDZRN3Q9UPQ7 MIR4713-201ENST00000582691 75 ntBASIC2.24□□□□□ -2.05
PDZRN3Q9UPQ7 Y_RNA.32-201ENST00000362589 110 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 SNORD113.3-201ENST00000364630 78 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 RNU7-102P-201ENST00000458948 62 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 RNU7-104P-201ENST00000459398 79 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 AC036111.3-201ENST00000526389 112 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 MIR7110-201ENST00000612638 86 ntBASIC2.23□□□□□ -2.05
PDZRN3Q9UPQ7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 RNU6-439P-201ENST00000384188 106 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 RNU6-364P-201ENST00000384387 107 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 RPS26P5-201ENST00000418544 335 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 RNU1-123P-201ENST00000458950 160 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 SNORA44.1-201ENST00000517031 108 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 uc_338.16-201ENST00000621804 95 ntBASIC2.22□□□□□ -2.05
PDZRN3Q9UPQ7 Y_RNA.125-201ENST00000363371 111 ntBASIC2.21□□□□□ -2.06
PDZRN3Q9UPQ7 SNORA33.1-201ENST00000364957 130 ntBASIC2.21□□□□□ -2.06
PDZRN3Q9UPQ7 SNORA40B-201ENST00000385573 128 ntBASIC2.21□□□□□ -2.06
PDZRN3Q9UPQ7 MT-TY-201ENST00000387409 66 ntBASIC2.21□□□□□ -2.06
PDZRN3Q9UPQ7 Y_RNA.633-201ENST00000459107 95 ntBASIC2.21□□□□□ -2.06
PDZRN3Q9UPQ7 AC027335.2-201ENST00000624030 375 ntBASIC2.21□□□□□ -2.06
PDZRN3Q9UPQ7 RNU6-986P-201ENST00000363133 102 ntBASIC2.2□□□□□ -2.06
PDZRN3Q9UPQ7 MIR938-201ENST00000401216 83 ntBASIC2.2□□□□□ -2.06
PDZRN3Q9UPQ7 RNU7-40P-201ENST00000516397 64 ntBASIC2.2□□□□□ -2.06
PDZRN3Q9UPQ7 MIR4303-201ENST00000581299 66 ntBASIC2.2□□□□□ -2.06
PDZRN3Q9UPQ7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
PDZRN3Q9UPQ7 SNORA9.1-201ENST00000362412 131 ntBASIC2.19□□□□□ -2.06
PDZRN3Q9UPQ7 RNU6-247P-201ENST00000362636 107 ntBASIC2.19□□□□□ -2.06
PDZRN3Q9UPQ7 SNORD116-16-201ENST00000384533 92 ntBASIC2.19□□□□□ -2.06
PDZRN3Q9UPQ7 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
PDZRN3Q9UPQ7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.19□□□□□ -2.06
PDZRN3Q9UPQ7 RNU6-810P-201ENST00000364001 107 ntBASIC2.18□□□□□ -2.06
PDZRN3Q9UPQ7 RNU7-95P-201ENST00000459222 64 ntBASIC2.18□□□□□ -2.06
PDZRN3Q9UPQ7 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
PDZRN3Q9UPQ7 SNORA77B-201ENST00000578179 125 ntBASIC2.18□□□□□ -2.06
PDZRN3Q9UPQ7 AC067863.3-201ENST00000624172 122 ntBASIC2.18□□□□□ -2.06
PDZRN3Q9UPQ7 SNORA15B-2-201ENST00000384058 135 ntBASIC2.17□□□□□ -2.06
PDZRN3Q9UPQ7 SNORA15B-1-201ENST00000384334 135 ntBASIC2.17□□□□□ -2.06
PDZRN3Q9UPQ7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.17□□□□□ -2.06
PDZRN3Q9UPQ7 Y_RNA.118-201ENST00000363300 101 ntBASIC2.16□□□□□ -2.06
PDZRN3Q9UPQ7 MIR3664-201ENST00000579074 99 ntBASIC2.16□□□□□ -2.06
PDZRN3Q9UPQ7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PDZRN3Q9UPQ7 AC008834.1-201ENST00000511612 175 ntBASIC2.15□□□□□ -2.07
PDZRN3Q9UPQ7 MIR4460-201ENST00000577862 86 ntBASIC2.15□□□□□ -2.07
PDZRN3Q9UPQ7 SNORD114-4-201ENST00000363962 75 ntBASIC2.14□□□□□ -2.07
PDZRN3Q9UPQ7 RNU6-392P-201ENST00000364926 101 ntBASIC2.14□□□□□ -2.07
PDZRN3Q9UPQ7 SNORA31.2-201ENST00000516019 134 ntBASIC2.14□□□□□ -2.07
PDZRN3Q9UPQ7 RNU6-419P-201ENST00000517030 63 ntBASIC2.14□□□□□ -2.07
PDZRN3Q9UPQ7 MIR4804-201ENST00000581683 73 ntBASIC2.14□□□□□ -2.07
PDZRN3Q9UPQ7 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
PDZRN3Q9UPQ7 Y_RNA.174-201ENST00000363781 105 ntBASIC2.13□□□□□ -2.07
PDZRN3Q9UPQ7 RNU6-269P-201ENST00000391077 97 ntBASIC2.13□□□□□ -2.07
PDZRN3Q9UPQ7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.13□□□□□ -2.07
PDZRN3Q9UPQ7 RNU7-56P-201ENST00000458744 62 ntBASIC2.13□□□□□ -2.07
PDZRN3Q9UPQ7 MIR4490-201ENST00000582647 84 ntBASIC2.13□□□□□ -2.07
PDZRN3Q9UPQ7 RNA5SP363-201ENST00000365072 115 ntBASIC2.12□□□□□ -2.07
PDZRN3Q9UPQ7 SNORD41.1-201ENST00000391000 69 ntBASIC2.12□□□□□ -2.07
PDZRN3Q9UPQ7 MIR934-201ENST00000401241 83 ntBASIC2.12□□□□□ -2.07
PDZRN3Q9UPQ7 RNU7-74P-201ENST00000459104 62 ntBASIC2.12□□□□□ -2.07
PDZRN3Q9UPQ7 BX248123.2-201ENST00000606318 124 ntBASIC2.12□□□□□ -2.07
PDZRN3Q9UPQ7 Y_RNA.74-201ENST00000362911 99 ntBASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 Y_RNA.282-201ENST00000364793 102 ntBASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 SNORA25.8-201ENST00000364831 128 ntBASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 SNORD111-201ENST00000408139 94 ntBASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 RNU6-165P-201ENST00000517170 99 ntBASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 SNORD53B-201ENST00000577887 78 ntBASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDZRN3Q9UPQ7 RNU6-924P-201ENST00000362926 108 ntBASIC2.1□□□□□ -2.07
PDZRN3Q9UPQ7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PDZRN3Q9UPQ7 SNORA75.2-201ENST00000391138 150 ntBASIC2.1□□□□□ -2.07
PDZRN3Q9UPQ7 SNORA75.3-201ENST00000391231 150 ntBASIC2.1□□□□□ -2.07
PDZRN3Q9UPQ7 RNU5B-6P-201ENST00000516765 68 ntBASIC2.1□□□□□ -2.07
PDZRN3Q9UPQ7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 RNU1-141P-201ENST00000364623 158 ntBASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 Y_RNA.327-201ENST00000365201 102 ntBASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 MIR30A-201ENST00000385092 71 ntBASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 RNU6-696P-201ENST00000390834 107 ntBASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 snoU13.18-201ENST00000459483 104 ntBASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
PDZRN3Q9UPQ7 RNU1-119P-201ENST00000391122 165 ntBASIC2.08□□□□□ -2.08
PDZRN3Q9UPQ7 MIR1276-201ENST00000408707 83 ntBASIC2.08□□□□□ -2.08
PDZRN3Q9UPQ7 AC098934.3-201ENST00000430450 190 ntBASIC2.08□□□□□ -2.08
PDZRN3Q9UPQ7 AL136317.1-201ENST00000612653 226 ntBASIC2.08□□□□□ -2.08
PDZRN3Q9UPQ7 MIR6504-201ENST00000613520 61 ntBASIC2.08□□□□□ -2.08
PDZRN3Q9UPQ7 SNORD1B-201ENST00000363091 84 ntBASIC2.07□□□□□ -2.08
PDZRN3Q9UPQ7 RNU6-172P-201ENST00000411000 93 ntBASIC2.07□□□□□ -2.08
PDZRN3Q9UPQ7 AC023827.1-201ENST00000569247 97 ntBASIC2.07□□□□□ -2.08
PDZRN3Q9UPQ7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.07□□□□□ -2.08
PDZRN3Q9UPQ7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDZRN3Q9UPQ7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDZRN3Q9UPQ7 SNORA63.6-201ENST00000364921 119 ntBASIC2.06□□□□□ -2.08
PDZRN3Q9UPQ7 MIR758-201ENST00000390227 88 ntBASIC2.06□□□□□ -2.08
PDZRN3Q9UPQ7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.06□□□□□ -2.08
PDZRN3Q9UPQ7 CYP3A54P-201ENST00000566950 75 ntBASIC2.06□□□□□ -2.08
PDZRN3Q9UPQ7 MIR3122-201ENST00000577243 73 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms