Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNORA36.1-201ENST00000363424 132 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 RNU6-1152P-201ENST00000384576 107 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 MIR617-201ENST00000385030 97 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 SNORA26.2-201ENST00000390922 122 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 RNU6-935P-201ENST00000410371 100 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 RNY4P29-201ENST00000410801 97 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 RNU7-74P-201ENST00000459104 62 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 AC093729.1-201ENST00000513074 128 ntBASIC0.71□□□□□ -2.3
DKK3Q9UBP4 SNORD115-37-201ENST00000363768 82 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 RNU6-979P-201ENST00000383896 107 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 RNA5SP292-201ENST00000390974 118 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 SNORA18.5-201ENST00000516616 101 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 MIR548AG2-201ENST00000581228 64 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 MIR5588-201ENST00000581890 63 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.7□□□□□ -2.3
DKK3Q9UBP4 MIR494-201ENST00000349529 81 ntBASIC0.69□□□□□ -2.3
DKK3Q9UBP4 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
DKK3Q9UBP4 Y_RNA.426-201ENST00000384068 113 ntBASIC0.69□□□□□ -2.3
DKK3Q9UBP4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
DKK3Q9UBP4 MIR2113-201ENST00000459007 91 ntBASIC0.69□□□□□ -2.3
DKK3Q9UBP4 RNA5SP268-201ENST00000516828 124 ntBASIC0.69□□□□□ -2.3
DKK3Q9UBP4 MIR4796-201ENST00000580742 81 ntBASIC0.69□□□□□ -2.3
DKK3Q9UBP4 MIR216B-201ENST00000390186 82 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 U3.27-201ENST00000391237 200 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 Y_RNA.611-201ENST00000410682 108 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 RNU7-171P-201ENST00000459581 62 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 AC022137.1-201ENST00000483735 151 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 SNORA72.7-201ENST00000516349 94 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 RNU7-153P-201ENST00000516455 62 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 AL162376.1-201ENST00000624117 175 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 MIR5087-201ENST00000635826 76 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 AC006160.2-201ENST00000637708 154 ntBASIC0.68□□□□□ -2.3
DKK3Q9UBP4 Y_RNA.73-201ENST00000362910 113 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 MIR548L-201ENST00000408303 86 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 RNA5SP227-201ENST00000516184 113 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 SNORA25.13-201ENST00000516395 103 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 AC140658.3-201ENST00000567603 271 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.67□□□□□ -2.3
DKK3Q9UBP4 RNA5SP517-201ENST00000364724 117 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 Y_RNA.388-201ENST00000383919 113 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 RNU6-242P-201ENST00000384359 107 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 SNORA8.2-201ENST00000384372 139 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 MIR519E-201ENST00000385075 84 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 RNU6-1057P-201ENST00000517162 102 ntBASIC0.66□□□□□ -2.3
DKK3Q9UBP4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
DKK3Q9UBP4 RNU6-624P-201ENST00000363411 107 ntBASIC0.65□□□□□ -2.31
DKK3Q9UBP4 RNY4P3-201ENST00000365254 95 ntBASIC0.65□□□□□ -2.31
DKK3Q9UBP4 Y_RNA.607-201ENST00000410597 98 ntBASIC0.65□□□□□ -2.31
DKK3Q9UBP4 MIR7107-201ENST00000611489 80 ntBASIC0.65□□□□□ -2.31
DKK3Q9UBP4 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
DKK3Q9UBP4 SNORA63.2-201ENST00000362603 126 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 SNORD118-201ENST00000363593 134 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 RNU6-1276P-201ENST00000365372 104 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 RNU6-1051P-201ENST00000365471 102 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 AC093423.1-201ENST00000440817 142 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 RNA5SP285-201ENST00000516619 119 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 SNORA62.5-201ENST00000516634 120 ntBASIC0.64□□□□□ -2.31
DKK3Q9UBP4 MIR451A-201ENST00000385059 72 ntBASIC0.63□□□□□ -2.31
DKK3Q9UBP4 RNU6-269P-201ENST00000391077 97 ntBASIC0.63□□□□□ -2.31
DKK3Q9UBP4 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
DKK3Q9UBP4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
DKK3Q9UBP4 MIR4666B-201ENST00000578142 81 ntBASIC0.62□□□□□ -2.31
DKK3Q9UBP4 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
DKK3Q9UBP4 AL627230.5-201ENST00000619807 58 ntBASIC0.62□□□□□ -2.31
DKK3Q9UBP4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.61□□□□□ -2.31
DKK3Q9UBP4 FGF7P7-201ENST00000514120 227 ntBASIC0.61□□□□□ -2.31
DKK3Q9UBP4 AC073869.9-201ENST00000641610 120 ntBASIC0.61□□□□□ -2.31
DKK3Q9UBP4 RNA5SP173-201ENST00000364857 136 ntBASIC0.6□□□□□ -2.31
DKK3Q9UBP4 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
DKK3Q9UBP4 RNU6-592P-201ENST00000411333 103 ntBASIC0.6□□□□□ -2.31
DKK3Q9UBP4 RNU6-557P-201ENST00000516842 110 ntBASIC0.6□□□□□ -2.31
DKK3Q9UBP4 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
DKK3Q9UBP4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
DKK3Q9UBP4 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 SNORA24B-201ENST00000384176 131 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 SNORD90-201ENST00000391145 111 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 RNU6-848P-201ENST00000515948 107 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 RNU6-617P-201ENST00000516147 107 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 RNU6-473P-201ENST00000516164 107 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.59□□□□□ -2.31
DKK3Q9UBP4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
DKK3Q9UBP4 RNU5F-1-201ENST00000362507 117 ntBASIC0.58□□□□□ -2.32
DKK3Q9UBP4 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
DKK3Q9UBP4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.58□□□□□ -2.32
DKK3Q9UBP4 MIR3140-201ENST00000583685 90 ntBASIC0.58□□□□□ -2.32
DKK3Q9UBP4 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
DKK3Q9UBP4 MIR548O2-201ENST00000616090 70 ntBASIC0.58□□□□□ -2.32
DKK3Q9UBP4 MIR2909-201ENST00000617113 69 ntBASIC0.58□□□□□ -2.32
DKK3Q9UBP4 Y_RNA.219-201ENST00000364232 113 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 Y_RNA.264-201ENST00000364665 102 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 MT-TY-201ENST00000387409 66 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 MIR1265-201ENST00000408444 86 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 RNU6-863P-201ENST00000515989 104 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 MIR5706-201ENST00000579841 80 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms