Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.26□□□□□ -2.21
TMEM39AQ9NV64 SNORD99-201ENST00000408612 74 ntBASIC1.26□□□□□ -2.21
TMEM39AQ9NV64 SCARNA18B-201ENST00000458806 135 ntBASIC1.26□□□□□ -2.21
TMEM39AQ9NV64 RNU6-807P-201ENST00000516805 107 ntBASIC1.26□□□□□ -2.21
TMEM39AQ9NV64 RNU6-303P-201ENST00000517091 106 ntBASIC1.26□□□□□ -2.21
TMEM39AQ9NV64 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 SNORA24B-201ENST00000384176 131 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 MIR617-201ENST00000385030 97 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 MIR548L-201ENST00000408303 86 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 AC011195.1-201ENST00000578177 177 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 Y_RNA.788-201ENST00000622394 112 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 MIR1297-201ENST00000637311 77 ntBASIC1.25□□□□□ -2.21
TMEM39AQ9NV64 AC097510.1-201ENST00000510945 133 ntBASIC1.24□□□□□ -2.21
TMEM39AQ9NV64 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
TMEM39AQ9NV64 RNA5SP47-201ENST00000517230 109 ntBASIC1.23□□□□□ -2.21
TMEM39AQ9NV64 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
TMEM39AQ9NV64 RNU6-340P-201ENST00000364005 107 ntBASIC1.22□□□□□ -2.21
TMEM39AQ9NV64 RNU2-59P-201ENST00000410482 191 ntBASIC1.22□□□□□ -2.21
TMEM39AQ9NV64 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
TMEM39AQ9NV64 MIR519E-201ENST00000385075 84 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 MIR216B-201ENST00000390186 82 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 SNORD41.1-201ENST00000391000 69 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 AC244098.3-201ENST00000424803 96 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 AC074348.1-201ENST00000426503 132 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 RNU7-74P-201ENST00000459104 62 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 MIR5000-201ENST00000577717 103 ntBASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TMEM39AQ9NV64 MIR18A-201ENST00000362310 71 ntBASIC1.2□□□□□ -2.22
TMEM39AQ9NV64 RNU6-716P-201ENST00000365621 103 ntBASIC1.2□□□□□ -2.22
TMEM39AQ9NV64 RNU6-1177P-201ENST00000391058 104 ntBASIC1.2□□□□□ -2.22
TMEM39AQ9NV64 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
TMEM39AQ9NV64 RNU6-824P-201ENST00000363724 104 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 RNU6-681P-201ENST00000364012 104 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 RNU6-726P-201ENST00000364680 107 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 Y_RNA.565-201ENST00000384719 101 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 Y_RNA.606-201ENST00000410579 103 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 SCARNA16.5-201ENST00000517114 183 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 MIR3134-201ENST00000579433 74 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 RN7SL793P-201ENST00000583259 296 ntBASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
TMEM39AQ9NV64 MIR373-201ENST00000362273 69 ntBASIC1.18□□□□□ -2.22
TMEM39AQ9NV64 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.18□□□□□ -2.22
TMEM39AQ9NV64 U6.81-201ENST00000612550 106 ntBASIC1.18□□□□□ -2.22
TMEM39AQ9NV64 Y_RNA.545-201ENST00000384652 105 ntBASIC1.17□□□□□ -2.22
TMEM39AQ9NV64 RNU4-45P-201ENST00000365469 141 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 RNU6-154P-201ENST00000384306 106 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 MIR216A-201ENST00000385063 110 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 RNU6-70P-201ENST00000516438 60 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 Y_RNA.681-201ENST00000516445 113 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 AL353765.1-201ENST00000605514 183 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 MIR4773-1-201ENST00000637203 78 ntBASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TMEM39AQ9NV64 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
TMEM39AQ9NV64 RNA5SP222-201ENST00000411039 105 ntBASIC1.15□□□□□ -2.23
TMEM39AQ9NV64 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
TMEM39AQ9NV64 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
TMEM39AQ9NV64 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.15□□□□□ -2.23
TMEM39AQ9NV64 RNU6-330P-201ENST00000363015 107 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 Y_RNA.258-201ENST00000364613 105 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 SNORA8.1-201ENST00000384250 140 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 RNU6-411P-201ENST00000384451 107 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 MIR548O2-201ENST00000616090 70 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 MIR664A-201ENST00000626086 82 ntBASIC1.14□□□□□ -2.23
TMEM39AQ9NV64 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
TMEM39AQ9NV64 RNU6-382P-201ENST00000365181 106 ntBASIC1.13□□□□□ -2.23
TMEM39AQ9NV64 RNA5SP227-201ENST00000516184 113 ntBASIC1.13□□□□□ -2.23
TMEM39AQ9NV64 MIR6828-201ENST00000636181 60 ntBASIC1.13□□□□□ -2.23
TMEM39AQ9NV64 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TMEM39AQ9NV64 AC073261.1-201ENST00000429409 121 ntBASIC1.12□□□□□ -2.23
TMEM39AQ9NV64 RNA5SP94-201ENST00000516917 108 ntBASIC1.12□□□□□ -2.23
TMEM39AQ9NV64 MIR3973-201ENST00000579824 107 ntBASIC1.12□□□□□ -2.23
TMEM39AQ9NV64 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
TMEM39AQ9NV64 SNORA36.1-201ENST00000363424 132 ntBASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 RNU6-269P-201ENST00000391077 97 ntBASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 AC093423.1-201ENST00000440817 142 ntBASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 RNU6-274P-201ENST00000459566 107 ntBASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 RNU6-523P-201ENST00000516304 54 ntBASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TMEM39AQ9NV64 RNU6V-201ENST00000384105 107 ntBASIC1.1□□□□□ -2.23
TMEM39AQ9NV64 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.1□□□□□ -2.23
TMEM39AQ9NV64 RNA5SP268-201ENST00000516828 124 ntBASIC1.1□□□□□ -2.23
TMEM39AQ9NV64 MIR4460-201ENST00000577862 86 ntBASIC1.1□□□□□ -2.23
TMEM39AQ9NV64 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 SNORA8.2-201ENST00000384372 139 ntBASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 SNORD75.2-201ENST00000408784 58 ntBASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 MIR3675-201ENST00000583661 73 ntBASIC1.09□□□□□ -2.23
TMEM39AQ9NV64 RNU6-495P-201ENST00000362995 107 ntBASIC1.08□□□□□ -2.24
TMEM39AQ9NV64 RNU1-141P-201ENST00000364623 158 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms