Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SNORD60.1-201ENST00000362451 73 ntBASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 AL157398.1-201ENST00000452981 186 ntBASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 SNORD18A-201ENST00000363753 72 ntBASIC1.79□□□□□ -2.12
PRDM9Q9NQV7 SNORA8.2-201ENST00000384372 139 ntBASIC1.79□□□□□ -2.12
PRDM9Q9NQV7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
PRDM9Q9NQV7 AC002429.1-201ENST00000437672 148 ntBASIC1.78□□□□□ -2.12
PRDM9Q9NQV7 MIR7978-201ENST00000636158 59 ntBASIC1.78□□□□□ -2.12
PRDM9Q9NQV7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 MIR222-201ENST00000384992 110 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 SNORD105-201ENST00000386910 85 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 FABP5P4-201ENST00000437203 171 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 SNORD113-2-201ENST00000391082 72 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 MIR548V-201ENST00000584165 80 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 SNORA15B-2-201ENST00000384058 135 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 SNORA15B-1-201ENST00000384334 135 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 RNU6-1184P-201ENST00000384588 108 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 SNORA75.1-201ENST00000391130 148 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 AL603825.1-201ENST00000438481 80 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 U7.7-201ENST00000459276 60 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-698P-201ENST00000363523 107 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-34P-201ENST00000364874 107 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-936P-201ENST00000384005 107 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-295P-201ENST00000516901 104 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 uc_338.10-201ENST00000621872 182 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 SNORD113-4-201ENST00000364802 75 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 AC021146.9-201ENST00000512503 156 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 SNORA25-201ENST00000384384 134 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 MIR573-201ENST00000384964 99 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 MIR517B-201ENST00000385102 67 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 RNU6-269P-201ENST00000391077 97 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 RNU7-174P-201ENST00000516248 59 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 AL162376.1-201ENST00000624117 175 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 RNU6-716P-201ENST00000365621 103 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 MIR758-201ENST00000390227 88 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 SNORD89-201ENST00000390981 114 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 RNA5SP484-201ENST00000458857 111 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 U2.7-201ENST00000619197 100 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 RNU6-520P-201ENST00000384717 104 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 MIR548C-201ENST00000384815 97 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 MIR630-201ENST00000384957 97 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 Y_RNA.633-201ENST00000459107 95 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 MIR3678-201ENST00000578455 94 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 SNORA63.6-201ENST00000364921 119 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR19B1-201ENST00000384829 87 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 RNU5B-6P-201ENST00000516765 68 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR6828-201ENST00000636181 60 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 SCARNA17.3-201ENST00000516381 125 ntBASIC1.68□□□□□ -2.14
PRDM9Q9NQV7 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
PRDM9Q9NQV7 Y_RNA.407-201ENST00000383986 113 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 MIR200A-201ENST00000384875 90 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 MIR3612-201ENST00000579753 87 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 U4.4-201ENST00000620626 117 ntBASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 snoU13.13-201ENST00000458842 104 ntBASIC1.65□□□□□ -2.15
PRDM9Q9NQV7 Y_RNA.125-201ENST00000363371 111 ntBASIC1.64□□□□□ -2.15
PRDM9Q9NQV7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.64□□□□□ -2.15
PRDM9Q9NQV7 AC025627.3-201ENST00000582078 182 ntBASIC1.64□□□□□ -2.15
PRDM9Q9NQV7 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
PRDM9Q9NQV7 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
PRDM9Q9NQV7 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
PRDM9Q9NQV7 SNORA33.1-201ENST00000364957 130 ntBASIC1.62□□□□□ -2.15
PRDM9Q9NQV7 RNU4-45P-201ENST00000365469 141 ntBASIC1.62□□□□□ -2.15
PRDM9Q9NQV7 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
PRDM9Q9NQV7 RNU7-119P-201ENST00000459279 63 ntBASIC1.61□□□□□ -2.15
PRDM9Q9NQV7 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
PRDM9Q9NQV7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms