Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA2A-201ENST00000383885 135 ntBASIC0.48□□□□□ -2.33
VTA1Q9NP79 RNU6-905P-201ENST00000384434 107 ntBASIC0.48□□□□□ -2.33
VTA1Q9NP79 RNA5SP89-201ENST00000410300 108 ntBASIC0.48□□□□□ -2.33
VTA1Q9NP79 AC069271.1-201ENST00000445577 156 ntBASIC0.48□□□□□ -2.33
VTA1Q9NP79 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
VTA1Q9NP79 SNORA62.5-201ENST00000516634 120 ntBASIC0.48□□□□□ -2.33
VTA1Q9NP79 RNU6-640P-201ENST00000363693 105 ntBASIC0.47□□□□□ -2.33
VTA1Q9NP79 MIR519E-201ENST00000385075 84 ntBASIC0.47□□□□□ -2.33
VTA1Q9NP79 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
VTA1Q9NP79 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VTA1Q9NP79 RNU1-141P-201ENST00000364623 158 ntBASIC0.45□□□□□ -2.34
VTA1Q9NP79 RNU6-811P-201ENST00000384069 107 ntBASIC0.45□□□□□ -2.34
VTA1Q9NP79 RNU6-162P-201ENST00000516228 103 ntBASIC0.45□□□□□ -2.34
VTA1Q9NP79 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
VTA1Q9NP79 MIR6086-201ENST00000638065 55 ntBASIC0.45□□□□□ -2.34
VTA1Q9NP79 AC093423.1-201ENST00000440817 142 ntBASIC0.44□□□□□ -2.34
VTA1Q9NP79 Y_RNA.190-201ENST00000363964 101 ntBASIC0.43□□□□□ -2.34
VTA1Q9NP79 Y_RNA.609-201ENST00000410669 89 ntBASIC0.43□□□□□ -2.34
VTA1Q9NP79 AC069503.3-201ENST00000618674 145 ntBASIC0.43□□□□□ -2.34
VTA1Q9NP79 MIR1236-201ENST00000408340 102 ntBASIC0.42□□□□□ -2.34
VTA1Q9NP79 AC006210.1-201ENST00000424882 111 ntBASIC0.42□□□□□ -2.34
VTA1Q9NP79 MIR3064-201ENST00000581130 66 ntBASIC0.42□□□□□ -2.34
VTA1Q9NP79 AC104996.3-201ENST00000590718 94 ntBASIC0.42□□□□□ -2.34
VTA1Q9NP79 RNY4P3-201ENST00000365254 95 ntBASIC0.41□□□□□ -2.34
VTA1Q9NP79 SNORD116-22-201ENST00000384430 92 ntBASIC0.41□□□□□ -2.34
VTA1Q9NP79 SNORD110-201ENST00000408189 75 ntBASIC0.41□□□□□ -2.34
VTA1Q9NP79 RNA5SP285-201ENST00000516619 119 ntBASIC0.41□□□□□ -2.34
VTA1Q9NP79 AC026421.1-201ENST00000519101 163 ntBASIC0.41□□□□□ -2.34
VTA1Q9NP79 SNORA9.1-201ENST00000362412 131 ntBASIC0.4□□□□□ -2.35
VTA1Q9NP79 Y_RNA.423-201ENST00000384057 113 ntBASIC0.4□□□□□ -2.35
VTA1Q9NP79 Y_RNA.491-201ENST00000384417 107 ntBASIC0.4□□□□□ -2.35
VTA1Q9NP79 MIR4460-201ENST00000577862 86 ntBASIC0.4□□□□□ -2.35
VTA1Q9NP79 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
VTA1Q9NP79 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.4□□□□□ -2.35
VTA1Q9NP79 RNA5SP484-201ENST00000458857 111 ntBASIC0.39□□□□□ -2.35
VTA1Q9NP79 MIR4514-201ENST00000581410 57 ntBASIC0.39□□□□□ -2.35
VTA1Q9NP79 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
VTA1Q9NP79 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
VTA1Q9NP79 RNA5SP128-201ENST00000365305 116 ntBASIC0.38□□□□□ -2.35
VTA1Q9NP79 MT-TY-201ENST00000387409 66 ntBASIC0.38□□□□□ -2.35
VTA1Q9NP79 NAMPTP3-201ENST00000569273 224 ntBASIC0.38□□□□□ -2.35
VTA1Q9NP79 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
VTA1Q9NP79 MIRLET7F1-201ENST00000362202 87 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 MIR451A-201ENST00000385059 72 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 RNA5SP63-201ENST00000391225 112 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
VTA1Q9NP79 MTATP6P29-201ENST00000415057 132 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 MIR4315-1-201ENST00000636800 73 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 MIR4315-2-201ENST00000640925 73 ntBASIC0.37□□□□□ -2.35
VTA1Q9NP79 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
VTA1Q9NP79 RNU6-132P-201ENST00000383863 107 ntBASIC0.36□□□□□ -2.35
VTA1Q9NP79 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
VTA1Q9NP79 AC069113.3-201ENST00000521019 150 ntBASIC0.36□□□□□ -2.35
VTA1Q9NP79 MIR4752-201ENST00000579672 72 ntBASIC0.36□□□□□ -2.35
VTA1Q9NP79 SNORA63.2-201ENST00000362603 126 ntBASIC0.35□□□□□ -2.35
VTA1Q9NP79 MIR488-201ENST00000365739 83 ntBASIC0.35□□□□□ -2.35
VTA1Q9NP79 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.35□□□□□ -2.35
VTA1Q9NP79 MIR4668-201ENST00000582284 70 ntBASIC0.35□□□□□ -2.35
VTA1Q9NP79 SNORA70.25-201ENST00000612741 95 ntBASIC0.35□□□□□ -2.35
VTA1Q9NP79 MIR2909-201ENST00000617113 69 ntBASIC0.35□□□□□ -2.35
VTA1Q9NP79 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.35
VTA1Q9NP79 RNU6-633P-201ENST00000362612 103 ntBASIC0.34□□□□□ -2.36
VTA1Q9NP79 RNU4-32P-201ENST00000363404 141 ntBASIC0.34□□□□□ -2.36
VTA1Q9NP79 MIR519C-201ENST00000385053 87 ntBASIC0.34□□□□□ -2.36
VTA1Q9NP79 MIR1265-201ENST00000408444 86 ntBASIC0.34□□□□□ -2.36
VTA1Q9NP79 SNORA18.5-201ENST00000516616 101 ntBASIC0.34□□□□□ -2.36
VTA1Q9NP79 MIR548O2-201ENST00000616090 70 ntBASIC0.34□□□□□ -2.36
VTA1Q9NP79 Y_RNA.125-201ENST00000363371 111 ntBASIC0.33□□□□□ -2.36
VTA1Q9NP79 RNU6-844P-201ENST00000517175 102 ntBASIC0.33□□□□□ -2.36
VTA1Q9NP79 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
VTA1Q9NP79 RNU6-652P-201ENST00000365488 107 ntBASIC0.32□□□□□ -2.36
VTA1Q9NP79 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.32□□□□□ -2.36
VTA1Q9NP79 MIR548AD-201ENST00000584780 82 ntBASIC0.32□□□□□ -2.36
VTA1Q9NP79 SNORD115-37-201ENST00000363768 82 ntBASIC0.31□□□□□ -2.36
VTA1Q9NP79 Y_RNA.620-201ENST00000411009 88 ntBASIC0.31□□□□□ -2.36
VTA1Q9NP79 SNORA25.13-201ENST00000516395 103 ntBASIC0.31□□□□□ -2.36
VTA1Q9NP79 MIR892B-201ENST00000401279 77 ntBASIC0.3□□□□□ -2.36
VTA1Q9NP79 RNY4P30-201ENST00000410216 95 ntBASIC0.3□□□□□ -2.36
VTA1Q9NP79 YWHAEP2-201ENST00000580066 112 ntBASIC0.3□□□□□ -2.36
VTA1Q9NP79 MIR4796-201ENST00000580742 81 ntBASIC0.3□□□□□ -2.36
VTA1Q9NP79 uc_338.10-201ENST00000621872 182 ntBASIC0.3□□□□□ -2.36
VTA1Q9NP79 RNU6-1051P-201ENST00000365471 102 ntBASIC0.29□□□□□ -2.36
VTA1Q9NP79 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
VTA1Q9NP79 MIR329-2-201ENST00000385029 84 ntBASIC0.29□□□□□ -2.36
VTA1Q9NP79 RNA5SP292-201ENST00000390974 118 ntBASIC0.29□□□□□ -2.36
VTA1Q9NP79 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
VTA1Q9NP79 MIR4743-201ENST00000584576 69 ntBASIC0.29□□□□□ -2.36
VTA1Q9NP79 RNU5F-1-201ENST00000362507 117 ntBASIC0.28□□□□□ -2.36
VTA1Q9NP79 SNORD114-4-201ENST00000363962 75 ntBASIC0.28□□□□□ -2.36
VTA1Q9NP79 RNU6-1131P-201ENST00000364955 107 ntBASIC0.28□□□□□ -2.36
VTA1Q9NP79 Y_RNA.369-201ENST00000365568 117 ntBASIC0.28□□□□□ -2.36
VTA1Q9NP79 MIR4636-201ENST00000582271 80 ntBASIC0.28□□□□□ -2.36
VTA1Q9NP79 Y_RNA.407-201ENST00000383986 113 ntBASIC0.27□□□□□ -2.37
VTA1Q9NP79 MIR501-201ENST00000390204 84 ntBASIC0.27□□□□□ -2.37
VTA1Q9NP79 HMGN2P22-201ENST00000427588 175 ntBASIC0.27□□□□□ -2.37
VTA1Q9NP79 FGF7P7-201ENST00000514120 227 ntBASIC0.27□□□□□ -2.37
VTA1Q9NP79 MIR4677-201ENST00000584153 80 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms