Protein–RNA interactions for Protein: Q9HCE7

SMURF1, E3 ubiquitin-protein ligase SMURF1, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1Q9HCE7 MIR499A-201ENST00000384903 122 ntBASIC0.8□□□□□ -2.28
SMURF1Q9HCE7 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
SMURF1Q9HCE7 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
SMURF1Q9HCE7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SMURF1Q9HCE7 RNU6-1094P-201ENST00000362416 104 ntBASIC0.79□□□□□ -2.28
SMURF1Q9HCE7 RNU1-93P-201ENST00000364704 169 ntBASIC0.79□□□□□ -2.28
SMURF1Q9HCE7 SNORA8.2-201ENST00000384372 139 ntBASIC0.79□□□□□ -2.28
SMURF1Q9HCE7 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
SMURF1Q9HCE7 MIR6504-201ENST00000613520 61 ntBASIC0.79□□□□□ -2.28
SMURF1Q9HCE7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.79□□□□□ -2.28
SMURF1Q9HCE7 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SMURF1Q9HCE7 Y_RNA.244-201ENST00000364484 109 ntBASIC0.78□□□□□ -2.28
SMURF1Q9HCE7 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
SMURF1Q9HCE7 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
SMURF1Q9HCE7 RNU6-380P-201ENST00000410207 107 ntBASIC0.78□□□□□ -2.28
SMURF1Q9HCE7 SNORD71-201ENST00000411292 86 ntBASIC0.78□□□□□ -2.28
SMURF1Q9HCE7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
SMURF1Q9HCE7 RNA5SP517-201ENST00000364724 117 ntBASIC0.77□□□□□ -2.29
SMURF1Q9HCE7 SNORA24B-201ENST00000384176 131 ntBASIC0.77□□□□□ -2.29
SMURF1Q9HCE7 AL162376.1-201ENST00000624117 175 ntBASIC0.77□□□□□ -2.29
SMURF1Q9HCE7 Y_RNA.12-201ENST00000362393 112 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 Y_RNA.226-201ENST00000364337 114 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 RNU6-269P-201ENST00000391077 97 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 AC097510.1-201ENST00000510945 133 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 YWHAEP2-201ENST00000580066 112 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 YWHAEP3-201ENST00000582767 121 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 MIR7107-201ENST00000611489 80 ntBASIC0.76□□□□□ -2.29
SMURF1Q9HCE7 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 Y_RNA.371-201ENST00000365591 113 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 SNORA40.8-201ENST00000411034 126 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 MIR4452-201ENST00000583004 71 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 AL078603.1-201ENST00000603824 313 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 AC073869.9-201ENST00000641610 120 ntBASIC0.75□□□□□ -2.29
SMURF1Q9HCE7 RNU2-59P-201ENST00000410482 191 ntBASIC0.74□□□□□ -2.29
SMURF1Q9HCE7 RNA5SP247-201ENST00000411181 105 ntBASIC0.74□□□□□ -2.29
SMURF1Q9HCE7 Y_RNA.224-201ENST00000364308 111 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 MIR520E-201ENST00000384867 87 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 AC093423.1-201ENST00000440817 142 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 RNU6-303P-201ENST00000517091 106 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 MIR548O2-201ENST00000616090 70 ntBASIC0.73□□□□□ -2.29
SMURF1Q9HCE7 SNORD118-201ENST00000363593 134 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 RNU6-824P-201ENST00000363724 104 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 RNU6-340P-201ENST00000364005 107 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 RNU1-141P-201ENST00000364623 158 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 Y_RNA.606-201ENST00000410579 103 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 MIR4460-201ENST00000577862 86 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 SNORA25.18-201ENST00000607153 114 ntBASIC0.72□□□□□ -2.29
SMURF1Q9HCE7 Y_RNA.532-201ENST00000384590 113 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 MIR518A1-201ENST00000385068 85 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 RNA5SP220-201ENST00000516298 104 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 RNU6-807P-201ENST00000516805 107 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 MIR4484-201ENST00000582855 83 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 U6.81-201ENST00000612550 106 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 MIR1297-201ENST00000637311 77 ntBASIC0.71□□□□□ -2.3
SMURF1Q9HCE7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 RNU6-681P-201ENST00000364012 104 ntBASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 MT-TY-201ENST00000387409 66 ntBASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 RNA5SP484-201ENST00000458857 111 ntBASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 MIR4662A-201ENST00000637499 67 ntBASIC0.7□□□□□ -2.3
SMURF1Q9HCE7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 RNU6-382P-201ENST00000365181 106 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 RNU6V-201ENST00000384105 107 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 AC074348.1-201ENST00000426503 132 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 SCARNA18B-201ENST00000458806 135 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 AC145423.2-201ENST00000610631 239 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 U7.4-201ENST00000614961 63 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 MIR4773-1-201ENST00000637203 78 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
SMURF1Q9HCE7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SMURF1Q9HCE7 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
SMURF1Q9HCE7 NAMPTP3-201ENST00000569273 224 ntBASIC0.68□□□□□ -2.3
SMURF1Q9HCE7 MIR6734-201ENST00000621166 68 ntBASIC0.68□□□□□ -2.3
SMURF1Q9HCE7 RNU6-495P-201ENST00000362995 107 ntBASIC0.67□□□□□ -2.3
SMURF1Q9HCE7 RNU6-54P-201ENST00000365563 107 ntBASIC0.67□□□□□ -2.3
SMURF1Q9HCE7 RNU6-42P-201ENST00000384165 107 ntBASIC0.67□□□□□ -2.3
SMURF1Q9HCE7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
SMURF1Q9HCE7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.67□□□□□ -2.3
SMURF1Q9HCE7 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.67□□□□□ -2.3
SMURF1Q9HCE7 RNU6-776P-201ENST00000364403 104 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 RNU6-1022P-201ENST00000365049 104 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 RNU6-154P-201ENST00000384306 106 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 MIR889-201ENST00000401280 79 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 SNORD75.2-201ENST00000408784 58 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 AC006210.1-201ENST00000424882 111 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 Y_RNA.788-201ENST00000622394 112 ntBASIC0.66□□□□□ -2.3
SMURF1Q9HCE7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.65□□□□□ -2.31
SMURF1Q9HCE7 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms