Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 AC069503.3-201ENST00000618674 145 ntBASIC0.36□□□□□ -2.35
PCNX3Q9H6A9 SNORD115-27-201ENST00000364430 82 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 Y_RNA.558-201ENST00000384685 113 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 RNU6-624P-201ENST00000363411 107 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 MIR519E-201ENST00000385075 84 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 MIR760-201ENST00000390220 80 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 RNU6-269P-201ENST00000391077 97 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 RNA5SP170-201ENST00000517150 101 ntBASIC0.35□□□□□ -2.35
PCNX3Q9H6A9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
PCNX3Q9H6A9 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 MIR488-201ENST00000365739 83 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 MIR451A-201ENST00000385059 72 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 SNORD110-201ENST00000408189 75 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.620-201ENST00000411009 88 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 RNU6-848P-201ENST00000515948 107 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 RNU6-617P-201ENST00000516147 107 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 RNU6-473P-201ENST00000516164 107 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
PCNX3Q9H6A9 RNU6-1134P-201ENST00000365156 101 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 RNU6-675P-201ENST00000384236 104 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 AC073261.1-201ENST00000429409 121 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MIR2113-201ENST00000459007 91 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MIR7107-201ENST00000611489 80 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 SNORA63.2-201ENST00000362603 126 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 RNU6-633P-201ENST00000362612 103 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 RNU6-979P-201ENST00000383896 107 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MIR4796-201ENST00000580742 81 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.32□□□□□ -2.36
PCNX3Q9H6A9 MT-TY-201ENST00000387409 66 ntBASIC0.32□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.611-201ENST00000410682 108 ntBASIC0.32□□□□□ -2.36
PCNX3Q9H6A9 SNORA18.5-201ENST00000516616 101 ntBASIC0.32□□□□□ -2.36
PCNX3Q9H6A9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
PCNX3Q9H6A9 MIR3064-201ENST00000581130 66 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 MIR548AG2-201ENST00000581228 64 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 uc_338.10-201ENST00000621872 182 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 RNU5F-1-201ENST00000362507 117 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 RNU1-141P-201ENST00000364623 158 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 RNU6V-201ENST00000384105 107 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 RNU6-267P-201ENST00000516714 103 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 AC140658.3-201ENST00000567603 271 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 RNU6-820P-201ENST00000384273 107 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 HMGN2P22-201ENST00000427588 175 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 MIR4668-201ENST00000582284 70 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.17-201ENST00000362433 111 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 SNORD114-4-201ENST00000363962 75 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 RNU6-1051P-201ENST00000365471 102 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 AC093423.1-201ENST00000440817 142 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 AC069271.1-201ENST00000445577 156 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 snoU13.17-201ENST00000458802 104 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 MIR5087-201ENST00000635826 76 ntBASIC0.3□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.29□□□□□ -2.36
PCNX3Q9H6A9 RNA5SP62-201ENST00000363457 110 ntBASIC0.29□□□□□ -2.36
PCNX3Q9H6A9 MIR516B1-201ENST00000385211 90 ntBASIC0.29□□□□□ -2.36
PCNX3Q9H6A9 U3.27-201ENST00000391237 200 ntBASIC0.29□□□□□ -2.36
PCNX3Q9H6A9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.28□□□□□ -2.36
PCNX3Q9H6A9 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
PCNX3Q9H6A9 RNA5SP457-201ENST00000363657 124 ntBASIC0.28□□□□□ -2.37
PCNX3Q9H6A9 RNU6-681P-201ENST00000364012 104 ntBASIC0.28□□□□□ -2.37
PCNX3Q9H6A9 RNA5SP227-201ENST00000516184 113 ntBASIC0.28□□□□□ -2.37
PCNX3Q9H6A9 MIR548AD-201ENST00000584780 82 ntBASIC0.28□□□□□ -2.37
PCNX3Q9H6A9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
PCNX3Q9H6A9 Y_RNA.593-201ENST00000410292 98 ntBASIC0.27□□□□□ -2.37
PCNX3Q9H6A9 MIR4667-201ENST00000578933 66 ntBASIC0.27□□□□□ -2.37
PCNX3Q9H6A9 SNORA70.25-201ENST00000612741 95 ntBASIC0.27□□□□□ -2.37
PCNX3Q9H6A9 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
PCNX3Q9H6A9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.27□□□□□ -2.37
PCNX3Q9H6A9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.26□□□□□ -2.37
PCNX3Q9H6A9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
PCNX3Q9H6A9 RNU7-24P-201ENST00000458867 62 ntBASIC0.26□□□□□ -2.37
PCNX3Q9H6A9 SNORD2-201ENST00000459163 69 ntBASIC0.26□□□□□ -2.37
PCNX3Q9H6A9 RNU6-495P-201ENST00000362995 107 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 MIR1302-4-201ENST00000408701 150 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 RNU7-171P-201ENST00000459581 62 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 RNU7-153P-201ENST00000516455 62 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 RNU6-219P-201ENST00000364728 107 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 SNORA50A-201ENST00000384225 134 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 SNORA26.2-201ENST00000390922 122 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 AC006210.1-201ENST00000424882 111 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms