Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU7-129P-201ENST00000516128 62 ntBASIC0.58□□□□□ -2.32
TRAIPQ9BWF2 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.58□□□□□ -2.32
TRAIPQ9BWF2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.57□□□□□ -2.32
TRAIPQ9BWF2 MIR6779-201ENST00000617283 64 ntBASIC0.57□□□□□ -2.32
TRAIPQ9BWF2 SNORA9.1-201ENST00000362412 131 ntBASIC0.56□□□□□ -2.32
TRAIPQ9BWF2 RNU6-132P-201ENST00000383863 107 ntBASIC0.56□□□□□ -2.32
TRAIPQ9BWF2 MTATP6P29-201ENST00000415057 132 ntBASIC0.56□□□□□ -2.32
TRAIPQ9BWF2 RNY1P4-201ENST00000384595 115 ntBASIC0.55□□□□□ -2.32
TRAIPQ9BWF2 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
TRAIPQ9BWF2 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
TRAIPQ9BWF2 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
TRAIPQ9BWF2 MIR488-201ENST00000365739 83 ntBASIC0.54□□□□□ -2.32
TRAIPQ9BWF2 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
TRAIPQ9BWF2 AC069503.3-201ENST00000618674 145 ntBASIC0.54□□□□□ -2.32
TRAIPQ9BWF2 SNORD115-37-201ENST00000363768 82 ntBASIC0.53□□□□□ -2.32
TRAIPQ9BWF2 FGF7P7-201ENST00000514120 227 ntBASIC0.53□□□□□ -2.32
TRAIPQ9BWF2 MIR4668-201ENST00000582284 70 ntBASIC0.53□□□□□ -2.32
TRAIPQ9BWF2 SNORA70.25-201ENST00000612741 95 ntBASIC0.53□□□□□ -2.32
TRAIPQ9BWF2 MIR6755-201ENST00000619993 66 ntBASIC0.53□□□□□ -2.32
TRAIPQ9BWF2 RNU6-1131P-201ENST00000364955 107 ntBASIC0.52□□□□□ -2.33
TRAIPQ9BWF2 RNU6-1134P-201ENST00000365156 101 ntBASIC0.52□□□□□ -2.33
TRAIPQ9BWF2 RNA5SP134-201ENST00000516492 96 ntBASIC0.52□□□□□ -2.33
TRAIPQ9BWF2 SNORA18.5-201ENST00000516616 101 ntBASIC0.52□□□□□ -2.33
TRAIPQ9BWF2 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
TRAIPQ9BWF2 MIR519C-201ENST00000385053 87 ntBASIC0.51□□□□□ -2.33
TRAIPQ9BWF2 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
TRAIPQ9BWF2 RNY1P7-201ENST00000384743 110 ntBASIC0.49□□□□□ -2.33
TRAIPQ9BWF2 MIR193B-201ENST00000384907 83 ntBASIC0.49□□□□□ -2.33
TRAIPQ9BWF2 AC093423.1-201ENST00000440817 142 ntBASIC0.49□□□□□ -2.33
TRAIPQ9BWF2 YWHAEP2-201ENST00000580066 112 ntBASIC0.49□□□□□ -2.33
TRAIPQ9BWF2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.48□□□□□ -2.33
TRAIPQ9BWF2 MT-TY-201ENST00000387409 66 ntBASIC0.48□□□□□ -2.33
TRAIPQ9BWF2 RNU6-844P-201ENST00000517175 102 ntBASIC0.48□□□□□ -2.33
TRAIPQ9BWF2 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
TRAIPQ9BWF2 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
TRAIPQ9BWF2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
TRAIPQ9BWF2 RNA5SP292-201ENST00000390974 118 ntBASIC0.47□□□□□ -2.33
TRAIPQ9BWF2 RNU6-1052P-201ENST00000411398 104 ntBASIC0.47□□□□□ -2.33
TRAIPQ9BWF2 RNU6-719P-201ENST00000516671 104 ntBASIC0.47□□□□□ -2.33
TRAIPQ9BWF2 MIR1273G-201ENST00000577677 100 ntBASIC0.47□□□□□ -2.33
TRAIPQ9BWF2 SNORA63.2-201ENST00000362603 126 ntBASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 AC069113.3-201ENST00000521019 150 ntBASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 MIR4796-201ENST00000580742 81 ntBASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRAIPQ9BWF2 RNU6-652P-201ENST00000365488 107 ntBASIC0.45□□□□□ -2.34
TRAIPQ9BWF2 RNU6-815P-201ENST00000384080 113 ntBASIC0.45□□□□□ -2.34
TRAIPQ9BWF2 RNU5F-1-201ENST00000362507 117 ntBASIC0.44□□□□□ -2.34
TRAIPQ9BWF2 RNU6-633P-201ENST00000362612 103 ntBASIC0.44□□□□□ -2.34
TRAIPQ9BWF2 RNU6-1051P-201ENST00000365471 102 ntBASIC0.44□□□□□ -2.34
TRAIPQ9BWF2 RNU1-29P-201ENST00000606574 126 ntBASIC0.44□□□□□ -2.34
TRAIPQ9BWF2 RNU6-402P-201ENST00000410678 103 ntBASIC0.43□□□□□ -2.34
TRAIPQ9BWF2 MIR4473-201ENST00000583731 91 ntBASIC0.43□□□□□ -2.34
TRAIPQ9BWF2 uc_338.10-201ENST00000621872 182 ntBASIC0.43□□□□□ -2.34
TRAIPQ9BWF2 MIR4315-1-201ENST00000636800 73 ntBASIC0.43□□□□□ -2.34
TRAIPQ9BWF2 MIR4315-2-201ENST00000640925 73 ntBASIC0.43□□□□□ -2.34
TRAIPQ9BWF2 Y_RNA.620-201ENST00000411009 88 ntBASIC0.42□□□□□ -2.34
TRAIPQ9BWF2 MIR548O2-201ENST00000616090 70 ntBASIC0.42□□□□□ -2.34
TRAIPQ9BWF2 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
TRAIPQ9BWF2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
TRAIPQ9BWF2 RNU5B-6P-201ENST00000516765 68 ntBASIC0.41□□□□□ -2.34
TRAIPQ9BWF2 MIR499B-201ENST00000636498 73 ntBASIC0.41□□□□□ -2.34
TRAIPQ9BWF2 MIR924-201ENST00000638017 53 ntBASIC0.41□□□□□ -2.34
TRAIPQ9BWF2 RNU6V-201ENST00000384105 107 ntBASIC0.4□□□□□ -2.35
TRAIPQ9BWF2 RNU6-49P-201ENST00000384256 107 ntBASIC0.4□□□□□ -2.35
TRAIPQ9BWF2 AC108740.1-201ENST00000498629 225 ntBASIC0.4□□□□□ -2.35
TRAIPQ9BWF2 SNORA25.13-201ENST00000516395 103 ntBASIC0.4□□□□□ -2.35
TRAIPQ9BWF2 IGLL4P-201ENST00000614590 133 ntBASIC0.4□□□□□ -2.35
TRAIPQ9BWF2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.39□□□□□ -2.35
TRAIPQ9BWF2 Y_RNA.558-201ENST00000384685 113 ntBASIC0.39□□□□□ -2.35
TRAIPQ9BWF2 RNA5SP170-201ENST00000517150 101 ntBASIC0.39□□□□□ -2.35
TRAIPQ9BWF2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
TRAIPQ9BWF2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.38□□□□□ -2.35
TRAIPQ9BWF2 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
TRAIPQ9BWF2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.37□□□□□ -2.35
TRAIPQ9BWF2 MIR5582-201ENST00000579697 68 ntBASIC0.37□□□□□ -2.35
TRAIPQ9BWF2 RNA5SP325-201ENST00000363756 130 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 SNORD114-4-201ENST00000363962 75 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 RNU6-294P-201ENST00000364999 102 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 HMGN2P22-201ENST00000427588 175 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 MIR3140-201ENST00000583685 90 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 MIR548AD-201ENST00000584780 82 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 AC084368.1-201ENST00000620935 65 ntBASIC0.36□□□□□ -2.35
TRAIPQ9BWF2 Y_RNA.17-201ENST00000362433 111 ntBASIC0.35□□□□□ -2.35
TRAIPQ9BWF2 Y_RNA.369-201ENST00000365568 117 ntBASIC0.35□□□□□ -2.35
TRAIPQ9BWF2 AC093729.1-201ENST00000513074 128 ntBASIC0.35□□□□□ -2.35
TRAIPQ9BWF2 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
TRAIPQ9BWF2 MIR4677-201ENST00000584153 80 ntBASIC0.35□□□□□ -2.35
TRAIPQ9BWF2 RNY1P1-201ENST00000364372 112 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 SNORD115-27-201ENST00000364430 82 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 MIR610-201ENST00000385139 96 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 MIR516B1-201ENST00000385211 90 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 RNU7-153P-201ENST00000516455 62 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 MIR8087-201ENST00000612745 78 ntBASIC0.34□□□□□ -2.36
TRAIPQ9BWF2 RNU6-219P-201ENST00000364728 107 ntBASIC0.33□□□□□ -2.36
TRAIPQ9BWF2 MIR892B-201ENST00000401279 77 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms