Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 Y_RNA.783-201ENST00000613546 102 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 RNU5B-6P-201ENST00000516765 68 ntBASIC1.72□□□□□ -2.13
USB1Q9BQ65 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
USB1Q9BQ65 Y_RNA.250-201ENST00000364542 110 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 RNU6-269P-201ENST00000391077 97 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 MIR4524B-201ENST00000581569 115 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 MIR3124-201ENST00000582636 67 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USB1Q9BQ65 SNORA8.2-201ENST00000384372 139 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 RNU6-1162P-201ENST00000384443 104 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 RNU6-237P-201ENST00000515985 71 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 MIR3612-201ENST00000579753 87 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 Y_RNA.236-201ENST00000364427 111 ntBASIC1.69□□□□□ -2.14
USB1Q9BQ65 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
USB1Q9BQ65 RNU6-302P-201ENST00000365249 107 ntBASIC1.68□□□□□ -2.14
USB1Q9BQ65 MIR573-201ENST00000384964 99 ntBASIC1.68□□□□□ -2.14
USB1Q9BQ65 SCARNA16.5-201ENST00000517114 183 ntBASIC1.68□□□□□ -2.14
USB1Q9BQ65 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.68□□□□□ -2.14
USB1Q9BQ65 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USB1Q9BQ65 RNA5SP432-201ENST00000362480 116 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 RNU6-482P-201ENST00000391068 107 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 MIR1289-2-201ENST00000408360 111 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 RNA5SP484-201ENST00000458857 111 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 AC015712.3-201ENST00000559380 164 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 MIR548V-201ENST00000584165 80 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USB1Q9BQ65 MIR548C-201ENST00000384815 97 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 MIR521-2-201ENST00000384818 87 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 MIR19B1-201ENST00000384829 87 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 RNU6-92P-201ENST00000605893 104 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USB1Q9BQ65 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USB1Q9BQ65 AL157398.1-201ENST00000452981 186 ntBASIC1.65□□□□□ -2.15
USB1Q9BQ65 snoU13.13-201ENST00000458842 104 ntBASIC1.65□□□□□ -2.15
USB1Q9BQ65 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
USB1Q9BQ65 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USB1Q9BQ65 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 SNORD124-201ENST00000459577 104 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 RNU6-122P-201ENST00000516818 107 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 AL162376.1-201ENST00000624117 175 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 MIR6845-201ENST00000613182 61 ntBASIC1.62□□□□□ -2.15
USB1Q9BQ65 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
USB1Q9BQ65 AC021146.9-201ENST00000512503 156 ntBASIC1.61□□□□□ -2.15
USB1Q9BQ65 MIR630-201ENST00000384957 97 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 AC003989.2-201ENST00000440224 169 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 MIR3938-201ENST00000582157 103 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 MIR6828-201ENST00000636181 60 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 RNU6-446P-201ENST00000362827 106 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 SNORA75.1-201ENST00000391130 148 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 RNA5SP227-201ENST00000516184 113 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
USB1Q9BQ65 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORA67.5-201ENST00000391036 107 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 MIR4769-201ENST00000584126 77 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORD60.1-201ENST00000362451 73 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 Y_RNA.407-201ENST00000383986 113 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 SNORA15B-2-201ENST00000384058 135 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 SNORA15B-1-201ENST00000384334 135 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 SCARNA17.3-201ENST00000516381 125 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.57□□□□□ -2.16
USB1Q9BQ65 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.57□□□□□ -2.16
USB1Q9BQ65 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
USB1Q9BQ65 MIR652-201ENST00000385278 98 ntBASIC1.56□□□□□ -2.16
USB1Q9BQ65 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.56□□□□□ -2.16
USB1Q9BQ65 MIR517B-201ENST00000385102 67 ntBASIC1.55□□□□□ -2.16
USB1Q9BQ65 Y_RNA.633-201ENST00000459107 95 ntBASIC1.55□□□□□ -2.16
USB1Q9BQ65 uc_338.10-201ENST00000621872 182 ntBASIC1.55□□□□□ -2.16
USB1Q9BQ65 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
USB1Q9BQ65 MIR18A-201ENST00000362310 71 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 SNORD113-2-201ENST00000391082 72 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 AC006210.1-201ENST00000424882 111 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 U2.7-201ENST00000619197 100 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 RNU6-698P-201ENST00000363523 107 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 RNU6-34P-201ENST00000364874 107 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORA63.6-201ENST00000364921 119 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORA33.1-201ENST00000364957 130 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USB1Q9BQ65 MIR764-201ENST00000390811 85 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORD110-201ENST00000408189 75 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 RNA5SP255-201ENST00000516370 107 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 AC011195.1-201ENST00000578177 177 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms