Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU6-681P-201ENST00000364012 104 ntBASIC1.45□□□□□ -2.18
SYNGAP1Q96PV0 MIR644A-201ENST00000385262 94 ntBASIC1.45□□□□□ -2.18
SYNGAP1Q96PV0 MIR942-201ENST00000401111 86 ntBASIC1.45□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-469P-201ENST00000516253 101 ntBASIC1.45□□□□□ -2.18
SYNGAP1Q96PV0 MTRNR2L2-201ENST00000604882 87 ntBASIC1.45□□□□□ -2.18
SYNGAP1Q96PV0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SYNGAP1Q96PV0 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SYNGAP1Q96PV0 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-871P-201ENST00000516122 100 ntBASIC1.44□□□□□ -2.18
SYNGAP1Q96PV0 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
SYNGAP1Q96PV0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-330P-201ENST00000363015 107 ntBASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-340P-201ENST00000364005 107 ntBASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 SNORD115-44-201ENST00000365391 82 ntBASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 MIR548L-201ENST00000408303 86 ntBASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-1015P-201ENST00000517121 99 ntBASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 MIR4773-1-201ENST00000637203 78 ntBASIC1.43□□□□□ -2.18
SYNGAP1Q96PV0 MIR154-201ENST00000385243 84 ntBASIC1.42□□□□□ -2.18
SYNGAP1Q96PV0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SYNGAP1Q96PV0 AC097510.1-201ENST00000510945 133 ntBASIC1.42□□□□□ -2.18
SYNGAP1Q96PV0 AC010487.4-201ENST00000637027 61 ntBASIC1.42□□□□□ -2.18
SYNGAP1Q96PV0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SYNGAP1Q96PV0 FABP5P4-201ENST00000437203 171 ntBASIC1.41□□□□□ -2.18
SYNGAP1Q96PV0 MIR2113-201ENST00000459007 91 ntBASIC1.41□□□□□ -2.18
SYNGAP1Q96PV0 MIR8087-201ENST00000612745 78 ntBASIC1.41□□□□□ -2.18
SYNGAP1Q96PV0 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.41□□□□□ -2.18
SYNGAP1Q96PV0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-154P-201ENST00000384306 106 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 SNORD105-201ENST00000386910 85 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 AC074348.1-201ENST00000426503 132 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 AC002350.1-201ENST00000490759 375 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 AC114801.3-201ENST00000510231 177 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 RNU7-161P-201ENST00000517289 62 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 AC067863.3-201ENST00000624172 122 ntBASIC1.4□□□□□ -2.18
SYNGAP1Q96PV0 RNU6-1177P-201ENST00000391058 104 ntBASIC1.4□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-523P-201ENST00000516304 54 ntBASIC1.4□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-824P-201ENST00000363724 104 ntBASIC1.39□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-587P-201ENST00000391282 106 ntBASIC1.39□□□□□ -2.19
SYNGAP1Q96PV0 SNORD124-201ENST00000459577 104 ntBASIC1.39□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.39□□□□□ -2.19
SYNGAP1Q96PV0 RNA5SP403-201ENST00000363598 108 ntBASIC1.38□□□□□ -2.19
SYNGAP1Q96PV0 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-788P-201ENST00000390967 104 ntBASIC1.38□□□□□ -2.19
SYNGAP1Q96PV0 RNU2-59P-201ENST00000410482 191 ntBASIC1.38□□□□□ -2.19
SYNGAP1Q96PV0 MIR3675-201ENST00000583661 73 ntBASIC1.38□□□□□ -2.19
SYNGAP1Q96PV0 MIR330-201ENST00000362196 94 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-716P-201ENST00000365621 103 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 SNORA24B-201ENST00000384176 131 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-1241P-201ENST00000384536 107 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 U3.27-201ENST00000391237 200 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 SNORD30.1-201ENST00000391309 70 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 U7.7-201ENST00000459276 60 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-274P-201ENST00000459566 107 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 MIR3920-201ENST00000581751 86 ntBASIC1.37□□□□□ -2.19
SYNGAP1Q96PV0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-1126P-201ENST00000384002 107 ntBASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 RNU6-687P-201ENST00000516443 89 ntBASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 AC244669.1-204ENST00000621564 178 ntBASIC1.36□□□□□ -2.19
SYNGAP1Q96PV0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SYNGAP1Q96PV0 MIR548AG2-201ENST00000581228 64 ntBASIC1.35□□□□□ -2.19
SYNGAP1Q96PV0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SYNGAP1Q96PV0 SNORD114-23-201ENST00000363536 72 ntBASIC1.34□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-382P-201ENST00000365181 106 ntBASIC1.34□□□□□ -2.2
SYNGAP1Q96PV0 Y_RNA.606-201ENST00000410579 103 ntBASIC1.34□□□□□ -2.2
SYNGAP1Q96PV0 CYP3A137P-201ENST00000562436 69 ntBASIC1.34□□□□□ -2.2
SYNGAP1Q96PV0 AC211469.2-201ENST00000605461 205 ntBASIC1.34□□□□□ -2.2
SYNGAP1Q96PV0 U6.81-201ENST00000612550 106 ntBASIC1.34□□□□□ -2.2
SYNGAP1Q96PV0 SNORD45.1-201ENST00000363181 77 ntBASIC1.33□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-649P-201ENST00000384463 107 ntBASIC1.33□□□□□ -2.2
SYNGAP1Q96PV0 AL691482.2-201ENST00000457453 84 ntBASIC1.33□□□□□ -2.2
SYNGAP1Q96PV0 MIR3612-201ENST00000579753 87 ntBASIC1.33□□□□□ -2.2
SYNGAP1Q96PV0 MIR373-201ENST00000362273 69 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-895P-201ENST00000384125 103 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 MIR617-201ENST00000385030 97 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-634P-201ENST00000459134 106 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-135P-201ENST00000516769 101 ntBASIC1.32□□□□□ -2.2
SYNGAP1Q96PV0 RNA5SP331-201ENST00000364986 107 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 SNORD28-201ENST00000384706 75 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 MIR200A-201ENST00000384875 90 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 MIR216B-201ENST00000390186 82 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 MIR3678-201ENST00000578455 94 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 MIR4639-201ENST00000584938 69 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNGAP1Q96PV0 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
SYNGAP1Q96PV0 MIR519E-201ENST00000385075 84 ntBASIC1.3□□□□□ -2.2
SYNGAP1Q96PV0 AC244098.3-201ENST00000424803 96 ntBASIC1.3□□□□□ -2.2
SYNGAP1Q96PV0 AC087343.1-201ENST00000477341 475 ntBASIC1.3□□□□□ -2.2
SYNGAP1Q96PV0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.29□□□□□ -2.2
SYNGAP1Q96PV0 RNU7-74P-201ENST00000459104 62 ntBASIC1.29□□□□□ -2.2
SYNGAP1Q96PV0 NAMPTP3-201ENST00000569273 224 ntBASIC1.29□□□□□ -2.2
SYNGAP1Q96PV0 AC011195.1-201ENST00000578177 177 ntBASIC1.29□□□□□ -2.2
SYNGAP1Q96PV0 AC025627.3-201ENST00000582078 182 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms