Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-327P-201ENST00000516270 127 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 MIR3179-1-201ENST00000578940 84 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 MIR3179-2-201ENST00000579107 84 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 MIR3179-3-201ENST00000579566 84 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 MIR3179-4-201ENST00000617599 84 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 AP001340.1-201ENST00000624405 217 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.23□□□□□ -2.61
RPRD1AQ96P16 MIR513C-201ENST00000401352 84 ntBASIC-1.23□□□□□ -2.61
RPRD1AQ96P16 RNU7-120P-201ENST00000459334 63 ntBASIC-1.23□□□□□ -2.61
RPRD1AQ96P16 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.23□□□□□ -2.61
RPRD1AQ96P16 MIR4503-201ENST00000582187 83 ntBASIC-1.23□□□□□ -2.61
RPRD1AQ96P16 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.23□□□□□ -2.61
RPRD1AQ96P16 RNY4P6-201ENST00000363667 96 ntBASIC-1.24□□□□□ -2.61
RPRD1AQ96P16 AC025521.1-201ENST00000621624 286 ntBASIC-1.24□□□□□ -2.61
RPRD1AQ96P16 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.25□□□□□ -2.61
RPRD1AQ96P16 SNORD22.1-201ENST00000516331 125 ntBASIC-1.25□□□□□ -2.61
RPRD1AQ96P16 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.25□□□□□ -2.61
RPRD1AQ96P16 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.26□□□□□ -2.61
RPRD1AQ96P16 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.26□□□□□ -2.61
RPRD1AQ96P16 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.26□□□□□ -2.61
RPRD1AQ96P16 MIR6854-201ENST00000614935 69 ntBASIC-1.26□□□□□ -2.61
RPRD1AQ96P16 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.27□□□□□ -2.61
RPRD1AQ96P16 FGF7P7-201ENST00000514120 227 ntBASIC-1.27□□□□□ -2.61
RPRD1AQ96P16 RNU6-65P-201ENST00000516332 98 ntBASIC-1.27□□□□□ -2.61
RPRD1AQ96P16 RNU6-719P-201ENST00000516671 104 ntBASIC-1.27□□□□□ -2.61
RPRD1AQ96P16 MIR4499-201ENST00000584834 69 ntBASIC-1.27□□□□□ -2.61
RPRD1AQ96P16 MIR8068-201ENST00000618032 68 ntBASIC-1.27□□□□□ -2.61
RPRD1AQ96P16 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.28□□□□□ -2.61
RPRD1AQ96P16 SNORD116-18-201ENST00000383961 92 ntBASIC-1.28□□□□□ -2.61
RPRD1AQ96P16 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.28□□□□□ -2.61
RPRD1AQ96P16 MIR517B-201ENST00000385102 67 ntBASIC-1.28□□□□□ -2.61
RPRD1AQ96P16 MIR4536-1-201ENST00000583537 88 ntBASIC-1.28□□□□□ -2.61
RPRD1AQ96P16 uc_338.19-201ENST00000616808 99 ntBASIC-1.28□□□□□ -2.61
RPRD1AQ96P16 RNU6-574P-201ENST00000384265 107 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 RNU6-196P-201ENST00000384315 107 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 MIR577-201ENST00000385196 96 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 RNA5SP470-201ENST00000516463 106 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 MIR4324-201ENST00000584846 72 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 U7.2-201ENST00000607576 63 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 MIR6773-201ENST00000612812 74 ntBASIC-1.29□□□□□ -2.62
RPRD1AQ96P16 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.3□□□□□ -2.62
RPRD1AQ96P16 SNORD50.2-201ENST00000365465 70 ntBASIC-1.3□□□□□ -2.62
RPRD1AQ96P16 MTND3P2-201ENST00000438452 342 ntBASIC-1.3□□□□□ -2.62
RPRD1AQ96P16 RNU7-85P-201ENST00000458851 63 ntBASIC-1.3□□□□□ -2.62
RPRD1AQ96P16 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.3□□□□□ -2.62
RPRD1AQ96P16 AC025166.1-201ENST00000612411 163 ntBASIC-1.3□□□□□ -2.62
RPRD1AQ96P16 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 AC022137.1-201ENST00000483735 151 ntBASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 MIR378F-201ENST00000578143 78 ntBASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 MIR548X2-201ENST00000579776 100 ntBASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 MIR6738-201ENST00000619620 64 ntBASIC-1.31□□□□□ -2.62
RPRD1AQ96P16 RNU6-592P-201ENST00000411333 103 ntBASIC-1.32□□□□□ -2.62
RPRD1AQ96P16 AP000533.3-201ENST00000447704 118 ntBASIC-1.32□□□□□ -2.62
RPRD1AQ96P16 RNU6-274P-201ENST00000459566 107 ntBASIC-1.32□□□□□ -2.62
RPRD1AQ96P16 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.32□□□□□ -2.62
RPRD1AQ96P16 SNORA63.6-201ENST00000364921 119 ntBASIC-1.33□□□□□ -2.62
RPRD1AQ96P16 SNORD58C-201ENST00000365223 64 ntBASIC-1.33□□□□□ -2.62
RPRD1AQ96P16 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.33□□□□□ -2.62
RPRD1AQ96P16 RNY1P9-201ENST00000532431 109 ntBASIC-1.33□□□□□ -2.62
RPRD1AQ96P16 snoR1.1-201ENST00000628177 80 ntBASIC-1.33□□□□□ -2.62
RPRD1AQ96P16 RNU6-200P-201ENST00000364743 107 ntBASIC-1.34□□□□□ -2.62
RPRD1AQ96P16 RNU6-132P-201ENST00000383863 107 ntBASIC-1.34□□□□□ -2.62
RPRD1AQ96P16 MIRLET7B-201ENST00000385140 83 ntBASIC-1.34□□□□□ -2.62
RPRD1AQ96P16 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.34□□□□□ -2.62
RPRD1AQ96P16 AL513043.2-201ENST00000573941 143 ntBASIC-1.34□□□□□ -2.62
RPRD1AQ96P16 MIR4694-201ENST00000578534 80 ntBASIC-1.34□□□□□ -2.62
RPRD1AQ96P16 SNORD74.6-201ENST00000364796 70 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 RNU6-431P-201ENST00000383874 107 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 RNU6-337P-201ENST00000391243 106 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 RNA5SP266-201ENST00000410273 108 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 RNU6-394P-201ENST00000410735 107 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.35□□□□□ -2.63
RPRD1AQ96P16 SNORD115-23-201ENST00000364461 82 ntBASIC-1.36□□□□□ -2.63
RPRD1AQ96P16 RNU6-905P-201ENST00000384434 107 ntBASIC-1.36□□□□□ -2.63
RPRD1AQ96P16 MIR569-201ENST00000385228 96 ntBASIC-1.36□□□□□ -2.63
RPRD1AQ96P16 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 SNORA63.2-201ENST00000362603 126 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 RNU6-495P-201ENST00000362995 107 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 RNU6-832P-201ENST00000363319 107 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 SNORD64-201ENST00000386683 67 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 MIR3140-201ENST00000583685 90 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 AL627230.5-201ENST00000619807 58 ntBASIC-1.37□□□□□ -2.63
RPRD1AQ96P16 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.38□□□□□ -2.63
RPRD1AQ96P16 AL035470.1-201ENST00000622571 220 ntBASIC-1.38□□□□□ -2.63
RPRD1AQ96P16 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.39□□□□□ -2.63
RPRD1AQ96P16 RNA5SP331-201ENST00000364986 107 ntBASIC-1.39□□□□□ -2.63
RPRD1AQ96P16 RNU6-804P-201ENST00000384286 107 ntBASIC-1.39□□□□□ -2.63
RPRD1AQ96P16 MIR587-201ENST00000384845 96 ntBASIC-1.39□□□□□ -2.63
RPRD1AQ96P16 MIR3064-201ENST00000581130 66 ntBASIC-1.39□□□□□ -2.63
RPRD1AQ96P16 RNY3P2-201ENST00000362918 102 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 RNU6-990P-201ENST00000364385 104 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 RNU6-10P-201ENST00000384036 107 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms