Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.51□□□□□ -2.49
ZNF558Q96NG5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
ZNF558Q96NG5 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
ZNF558Q96NG5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.52□□□□□ -2.49
ZNF558Q96NG5 RNU6-75P-201ENST00000515944 104 ntBASIC-0.52□□□□□ -2.49
ZNF558Q96NG5 AC025521.1-201ENST00000621624 286 ntBASIC-0.52□□□□□ -2.49
ZNF558Q96NG5 U6.95-201ENST00000636931 70 ntBASIC-0.52□□□□□ -2.49
ZNF558Q96NG5 RNY4P3-201ENST00000365254 95 ntBASIC-0.53□□□□□ -2.49
ZNF558Q96NG5 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.53□□□□□ -2.49
ZNF558Q96NG5 AC244090.1-201ENST00000441884 93 ntBASIC-0.53□□□□□ -2.49
ZNF558Q96NG5 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.53□□□□□ -2.49
ZNF558Q96NG5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.53□□□□□ -2.49
ZNF558Q96NG5 RNU6-86P-201ENST00000606534 107 ntBASIC-0.53□□□□□ -2.49
ZNF558Q96NG5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.54□□□□□ -2.5
ZNF558Q96NG5 SNORD50.2-201ENST00000365465 70 ntBASIC-0.54□□□□□ -2.5
ZNF558Q96NG5 U3.27-201ENST00000391237 200 ntBASIC-0.54□□□□□ -2.5
ZNF558Q96NG5 MIR5009-201ENST00000578736 100 ntBASIC-0.54□□□□□ -2.5
ZNF558Q96NG5 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 MIR652-201ENST00000385278 98 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 RPS29P8-201ENST00000445109 171 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 snoU13.19-201ENST00000459148 104 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 RNU6-659P-201ENST00000516454 104 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 MIR3613-201ENST00000579844 87 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 AL590491.3-201ENST00000610731 82 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 AL391099.1-201ENST00000624635 187 ntBASIC-0.55□□□□□ -2.5
ZNF558Q96NG5 SNORD95.1-201ENST00000364099 68 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 SNORD45B-201ENST00000364617 72 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 RNU6-907P-201ENST00000390924 102 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 AC114755.3-201ENST00000481111 251 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 SNORD33.1-201ENST00000516213 88 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
ZNF558Q96NG5 SNORD114-15-201ENST00000364687 72 ntBASIC-0.57□□□□□ -2.5
ZNF558Q96NG5 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.57□□□□□ -2.5
ZNF558Q96NG5 MIR451A-201ENST00000385059 72 ntBASIC-0.57□□□□□ -2.5
ZNF558Q96NG5 RNU6-65P-201ENST00000516332 98 ntBASIC-0.57□□□□□ -2.5
ZNF558Q96NG5 AL513043.2-201ENST00000573941 143 ntBASIC-0.57□□□□□ -2.5
ZNF558Q96NG5 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.58□□□□□ -2.5
ZNF558Q96NG5 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.58□□□□□ -2.5
ZNF558Q96NG5 MIR548A1-201ENST00000385041 97 ntBASIC-0.58□□□□□ -2.5
ZNF558Q96NG5 MIR548A3-201ENST00000385297 97 ntBASIC-0.58□□□□□ -2.5
ZNF558Q96NG5 MIR3671-201ENST00000580455 88 ntBASIC-0.58□□□□□ -2.5
ZNF558Q96NG5 MIR4536-1-201ENST00000583537 88 ntBASIC-0.58□□□□□ -2.5
ZNF558Q96NG5 SNORD75.1-201ENST00000408373 60 ntBASIC-0.59□□□□□ -2.5
ZNF558Q96NG5 MIR548I1-201ENST00000408810 149 ntBASIC-0.59□□□□□ -2.5
ZNF558Q96NG5 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.59□□□□□ -2.5
ZNF558Q96NG5 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.59□□□□□ -2.5
ZNF558Q96NG5 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.6□□□□□ -2.51
ZNF558Q96NG5 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.6□□□□□ -2.51
ZNF558Q96NG5 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.6□□□□□ -2.51
ZNF558Q96NG5 RNU7-85P-201ENST00000458851 63 ntBASIC-0.6□□□□□ -2.51
ZNF558Q96NG5 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.61□□□□□ -2.51
ZNF558Q96NG5 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.61□□□□□ -2.51
ZNF558Q96NG5 RNU6-813P-201ENST00000384691 107 ntBASIC-0.61□□□□□ -2.51
ZNF558Q96NG5 RNU6-644P-201ENST00000391155 98 ntBASIC-0.61□□□□□ -2.51
ZNF558Q96NG5 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.61□□□□□ -2.51
ZNF558Q96NG5 RNU6-455P-201ENST00000384681 107 ntBASIC-0.62□□□□□ -2.51
ZNF558Q96NG5 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.63□□□□□ -2.51
ZNF558Q96NG5 RNU6-209P-201ENST00000384118 107 ntBASIC-0.63□□□□□ -2.51
ZNF558Q96NG5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
ZNF558Q96NG5 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
ZNF558Q96NG5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 RNU6-54P-201ENST00000365563 107 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD116-14-201ENST00000383894 92 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD116-17-201ENST00000383929 92 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD116-15-201ENST00000384445 92 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD116-19-201ENST00000384729 92 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 MIR9-2-201ENST00000384838 87 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 SNORD2-201ENST00000459163 69 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.64□□□□□ -2.51
ZNF558Q96NG5 RNU4-36P-201ENST00000364294 144 ntBASIC-0.65□□□□□ -2.51
ZNF558Q96NG5 AC103810.7-201ENST00000607821 91 ntBASIC-0.65□□□□□ -2.51
ZNF558Q96NG5 RNU6-900P-201ENST00000384498 102 ntBASIC-0.66□□□□□ -2.52
ZNF558Q96NG5 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.66□□□□□ -2.52
ZNF558Q96NG5 SNORA49-201ENST00000386157 136 ntBASIC-0.66□□□□□ -2.52
ZNF558Q96NG5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.66□□□□□ -2.52
ZNF558Q96NG5 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 RNU6-880P-201ENST00000384526 107 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 RNU6-30P-201ENST00000384561 107 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 MIR224-201ENST00000384889 81 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 MIR548U-201ENST00000390728 81 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 MIR3668-201ENST00000582138 75 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 MIR4777-201ENST00000583710 86 ntBASIC-0.67□□□□□ -2.52
ZNF558Q96NG5 RNU6-704P-201ENST00000364162 103 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 RNU6-132P-201ENST00000383863 107 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 RNU6-412P-201ENST00000516434 106 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 AP000676.1-201ENST00000533307 52 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 MIR3133-201ENST00000583157 78 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 AC145423.2-201ENST00000610631 239 ntBASIC-0.68□□□□□ -2.52
ZNF558Q96NG5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.69□□□□□ -2.52
ZNF558Q96NG5 SNORD4B-201ENST00000459083 72 ntBASIC-0.69□□□□□ -2.52
ZNF558Q96NG5 MIR3064-201ENST00000581130 66 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms