Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 FGF7P7-201ENST00000514120 227 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 RNU6-971P-201ENST00000516920 106 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 MIR4280-201ENST00000582178 76 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 MIR3140-201ENST00000583685 90 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 MIR5704-201ENST00000584029 77 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 uc_338.36-201ENST00000622331 158 ntBASIC-0.41□□□□□ -2.48
ZNF560Q96MR9 AL157777.2-201ENST00000258070 137 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.42□□□□□ -2.48
ZNF560Q96MR9 RNY3P2-201ENST00000362918 102 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 RNU6-900P-201ENST00000384498 102 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 RNU6-182P-201ENST00000516970 105 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 AC103810.7-201ENST00000607821 91 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 MIR8068-201ENST00000618032 68 ntBASIC-0.43□□□□□ -2.48
ZNF560Q96MR9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 RNU6-990P-201ENST00000364385 104 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 SNORA24B-201ENST00000384176 131 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 MIR548A1-201ENST00000385041 97 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 SNORA19.1-201ENST00000410656 129 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 RNU6-795P-201ENST00000516323 103 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 SNORA40.17-201ENST00000517256 115 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 AC068339.1-201ENST00000526965 141 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 MIR3064-201ENST00000581130 66 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 MIR4802-201ENST00000581881 80 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 AC090425.1-201ENST00000610007 140 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 MIR3914-2-201ENST00000637339 95 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 AC093726.3-201ENST00000637588 150 ntBASIC-0.44□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 RNA5SP292-201ENST00000390974 118 ntBASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 MIR4679-2-201ENST00000578358 77 ntBASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 MIR4777-201ENST00000583710 86 ntBASIC-0.45□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 SNORA40-201ENST00000388090 126 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 SNORA3B-201ENST00000391305 131 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 RNU6-65P-201ENST00000516332 98 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 MIR5589-201ENST00000579442 60 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 MIR4536-1-201ENST00000583537 88 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 AC096720.1-201ENST00000604441 183 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 AC012531.4-201ENST00000616509 177 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 MIR6851-201ENST00000617060 67 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
ZNF560Q96MR9 RNU6-901P-201ENST00000384593 106 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 RNU6-337P-201ENST00000391243 106 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 SNORD4B-201ENST00000459083 72 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 MIR5009-201ENST00000578736 100 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 AC104996.3-201ENST00000590718 94 ntBASIC-0.47□□□□□ -2.48
ZNF560Q96MR9 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.48□□□□□ -2.49
ZNF560Q96MR9 MIR6773-201ENST00000612812 74 ntBASIC-0.48□□□□□ -2.49
ZNF560Q96MR9 AC090617.8-201ENST00000623339 167 ntBASIC-0.48□□□□□ -2.49
ZNF560Q96MR9 SNORA63.2-201ENST00000362603 126 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-495P-201ENST00000362995 107 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-905P-201ENST00000384434 107 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-813P-201ENST00000384691 107 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 MIR216B-201ENST00000390186 82 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 U3.27-201ENST00000391237 200 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-592P-201ENST00000411333 103 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 RNU6-659P-201ENST00000516454 104 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 MIR4636-201ENST00000582271 80 ntBASIC-0.49□□□□□ -2.49
ZNF560Q96MR9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.5□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.5□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.5□□□□□ -2.49
ZNF560Q96MR9 MIRLET7B-201ENST00000385140 83 ntBASIC-0.5□□□□□ -2.49
ZNF560Q96MR9 snosnR66.1-201ENST00000391095 99 ntBASIC-0.5□□□□□ -2.49
ZNF560Q96MR9 RNU6-644P-201ENST00000391155 98 ntBASIC-0.5□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 SNORD115-23-201ENST00000364461 82 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 SNORD45B-201ENST00000364617 72 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 SNORA63.6-201ENST00000364921 119 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 RNY1P5-201ENST00000383890 115 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 RNU6-907P-201ENST00000390924 102 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 AP001180.6-201ENST00000584918 159 ntBASIC-0.51□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.52□□□□□ -2.49
ZNF560Q96MR9 RNU6-80P-201ENST00000384195 107 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms