Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MIR3064-201ENST00000581130 66 ntBASIC-1.05□□□□□ -2.58
ZNF439Q8NDP4 MIR548S-201ENST00000581352 82 ntBASIC-1.05□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 SNORA33.1-201ENST00000364957 130 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 MIR1255B2-201ENST00000408618 67 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 SNORD75.2-201ENST00000408784 58 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 snoU13.17-201ENST00000458802 104 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 RNU7-197P-201ENST00000458836 62 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 AC141273.2-201ENST00000618989 130 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 U6.104-201ENST00000637979 90 ntBASIC-1.06□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 MIR203A-201ENST00000384836 110 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 MIR548A1-201ENST00000385041 97 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 MIR577-201ENST00000385196 96 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 RNU7-24P-201ENST00000458867 62 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 snoU13.19-201ENST00000459148 104 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 RNU6-781P-201ENST00000516377 101 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 MIR3613-201ENST00000579844 87 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 MIR6818-201ENST00000621576 65 ntBASIC-1.07□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNU6-382P-201ENST00000365181 106 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNU6-816P-201ENST00000390914 107 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNA5SP292-201ENST00000390974 118 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 SNORA26.4-201ENST00000391188 123 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 MIR548H3-201ENST00000408771 118 ntBASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.08□□□□□ -2.58
ZNF439Q8NDP4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 AC022028.1-201ENST00000412054 408 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 CYP3A54P-201ENST00000566950 75 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 AC130289.1-201ENST00000577321 73 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 AC104996.3-201ENST00000590718 94 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 AC132825.6-201ENST00000638861 357 ntBASIC-1.09□□□□□ -2.58
ZNF439Q8NDP4 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 RNU6-915P-201ENST00000364943 103 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 RNU6-639P-201ENST00000384074 107 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 RNU6-260P-201ENST00000384092 107 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 MIR29B1-201ENST00000385015 81 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 MIR889-201ENST00000401280 79 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 RNA5SP136-201ENST00000410906 107 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 AP002795.1-201ENST00000534879 84 ntBASIC-1.1□□□□□ -2.59
ZNF439Q8NDP4 SNORD115-33-201ENST00000363723 82 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 RNU6-824P-201ENST00000363724 104 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 RNU4-11P-201ENST00000365287 132 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 MTCYBP6-201ENST00000441810 138 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 SNORD57-201ENST00000448188 72 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 SNORD4B-201ENST00000459083 72 ntBASIC-1.11□□□□□ -2.59
ZNF439Q8NDP4 RNU6-924P-201ENST00000362926 108 ntBASIC-1.12□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.12□□□□□ -2.59
ZNF439Q8NDP4 MIR527-201ENST00000385244 85 ntBASIC-1.12□□□□□ -2.59
ZNF439Q8NDP4 MIR548F4-201ENST00000408515 105 ntBASIC-1.12□□□□□ -2.59
ZNF439Q8NDP4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.12□□□□□ -2.59
ZNF439Q8NDP4 MIR3165-201ENST00000579874 75 ntBASIC-1.12□□□□□ -2.59
ZNF439Q8NDP4 RNU4-32P-201ENST00000363404 141 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 SNORA81.3-201ENST00000517283 198 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 MIR548AG1-201ENST00000579932 66 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 MIR3657-201ENST00000584818 117 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 MIR4320-201ENST00000636981 65 ntBASIC-1.13□□□□□ -2.59
ZNF439Q8NDP4 RNU6-832P-201ENST00000363319 107 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 MIR519A2-201ENST00000384990 87 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 MIR548U-201ENST00000390728 81 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 RNA5SP476-201ENST00000516613 103 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 RNU6-111P-201ENST00000517179 105 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 AC103810.7-201ENST00000607821 91 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 MIR6509-201ENST00000614603 85 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 AC091912.2-201ENST00000624798 167 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 MIR4773-1-201ENST00000637203 78 ntBASIC-1.14□□□□□ -2.59
ZNF439Q8NDP4 RNY4P6-201ENST00000363667 96 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.15□□□□□ -2.59
ZNF439Q8NDP4 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms