Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 SNORD58C-201ENST00000365223 64 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 MIR604-201ENST00000384880 94 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 MIR569-201ENST00000385228 96 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 FGF7P7-201ENST00000514120 227 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 RNU6-973P-201ENST00000364690 107 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 U3.27-201ENST00000391237 200 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 RNU7-85P-201ENST00000458851 63 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 RNU6-65P-201ENST00000516332 98 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 MIR4536-1-201ENST00000583537 88 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 SNORD50.2-201ENST00000365465 70 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 AL500527.2-201ENST00000454105 95 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 SNORD2-201ENST00000459163 69 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 MIR3144-201ENST00000579460 79 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 MIR8068-201ENST00000618032 68 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 SNORD114-4-201ENST00000363962 75 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 RNU6-721P-201ENST00000410155 105 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 AL513043.2-201ENST00000573941 143 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 MIR3613-201ENST00000579844 87 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 RNU6-132P-201ENST00000383863 107 ntBASIC-1.09□□□□□ -2.58
CCDC50Q8IVM0 AL035470.1-201ENST00000622571 220 ntBASIC-1.09□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 MTND5P41-201ENST00000517498 206 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 MIR4694-201ENST00000578534 80 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 MIR4499-201ENST00000584834 69 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 RNU6-832P-201ENST00000363319 107 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR518B-201ENST00000385127 83 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 SNORD22.1-201ENST00000516331 125 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 RNU6-426P-201ENST00000516464 97 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-1-201ENST00000578940 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-2-201ENST00000579107 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-3-201ENST00000579566 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3140-201ENST00000583685 90 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-4-201ENST00000617599 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.12□□□□□ -2.59
CCDC50Q8IVM0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 MIR6773-201ENST00000612812 74 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 MIR6854-201ENST00000614935 69 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 uc_338.19-201ENST00000616808 99 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 SNORA13-201ENST00000458790 133 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 AC108676.2-201ENST00000605225 163 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 RNY3P2-201ENST00000362918 102 ntBASIC-1.15□□□□□ -2.59
CCDC50Q8IVM0 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
CCDC50Q8IVM0 RNU6-772P-201ENST00000516042 105 ntBASIC-1.15□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 RNU6-337P-201ENST00000391243 106 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 MTND4LP9-201ENST00000427694 174 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 RNU6-758P-201ENST00000516292 89 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 SNORA63.2-201ENST00000362603 126 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 RNU6-990P-201ENST00000364385 104 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 AC068339.1-201ENST00000526965 141 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 MIR378F-201ENST00000578143 78 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 MIR3064-201ENST00000581130 66 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 snoR1.1-201ENST00000628177 80 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 RNU6-495P-201ENST00000362995 107 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 RNA5SP368-201ENST00000364298 116 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 RNU6-905P-201ENST00000384434 107 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 MIR517B-201ENST00000385102 67 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 RNU6-592P-201ENST00000411333 103 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 AP000533.3-201ENST00000447704 118 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 AC103810.7-201ENST00000607821 91 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 MIRLET7B-201ENST00000385140 83 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 AC022137.1-201ENST00000483735 151 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 RNA5SP470-201ENST00000516463 106 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 MIR4679-2-201ENST00000578358 77 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 AL157777.2-201ENST00000258070 137 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 SCARNA18B-201ENST00000458806 135 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 AC104996.3-201ENST00000590718 94 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.21□□□□□ -2.6
CCDC50Q8IVM0 SNORA24B-201ENST00000384176 131 ntBASIC-1.21□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 290.1 ms