Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
UBE3BQ7Z3V4 AC093729.1-201ENST00000513074 128 ntBASIC0.66□□□□□ -2.3
UBE3BQ7Z3V4 RNU7-153P-201ENST00000516455 62 ntBASIC0.66□□□□□ -2.3
UBE3BQ7Z3V4 MIR4796-201ENST00000580742 81 ntBASIC0.66□□□□□ -2.3
UBE3BQ7Z3V4 AC062037.1-201ENST00000605302 128 ntBASIC0.66□□□□□ -2.3
UBE3BQ7Z3V4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.66□□□□□ -2.3
UBE3BQ7Z3V4 RNU6-979P-201ENST00000383896 107 ntBASIC0.65□□□□□ -2.31
UBE3BQ7Z3V4 RNU6-269P-201ENST00000391077 97 ntBASIC0.65□□□□□ -2.31
UBE3BQ7Z3V4 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
UBE3BQ7Z3V4 RN7SKP12-201ENST00000516275 143 ntBASIC0.65□□□□□ -2.31
UBE3BQ7Z3V4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.65□□□□□ -2.31
UBE3BQ7Z3V4 MIR494-201ENST00000349529 81 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 Y_RNA.73-201ENST00000362910 113 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 SNORD115-37-201ENST00000363768 82 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 MIR216B-201ENST00000390186 82 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 U3.27-201ENST00000391237 200 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 Y_RNA.611-201ENST00000410682 108 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 RNU6-1057P-201ENST00000517162 102 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 MIR5588-201ENST00000581890 63 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 AC006160.2-201ENST00000637708 154 ntBASIC0.64□□□□□ -2.31
UBE3BQ7Z3V4 RNU6-1152P-201ENST00000384576 107 ntBASIC0.63□□□□□ -2.31
UBE3BQ7Z3V4 MIR451A-201ENST00000385059 72 ntBASIC0.63□□□□□ -2.31
UBE3BQ7Z3V4 AC140658.3-201ENST00000567603 271 ntBASIC0.63□□□□□ -2.31
UBE3BQ7Z3V4 AC010487.4-201ENST00000637027 61 ntBASIC0.63□□□□□ -2.31
UBE3BQ7Z3V4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 RNY4P29-201ENST00000410801 97 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 SNORD71-201ENST00000411292 86 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 AC022137.1-201ENST00000483735 151 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 SNORA25.13-201ENST00000516395 103 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 SNORA25.18-201ENST00000607153 114 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 AC073869.9-201ENST00000641610 120 ntBASIC0.62□□□□□ -2.31
UBE3BQ7Z3V4 SNORA63.2-201ENST00000362603 126 ntBASIC0.61□□□□□ -2.31
UBE3BQ7Z3V4 RNU6-1051P-201ENST00000365471 102 ntBASIC0.61□□□□□ -2.31
UBE3BQ7Z3V4 Y_RNA.426-201ENST00000384068 113 ntBASIC0.61□□□□□ -2.31
UBE3BQ7Z3V4 SNORA26.2-201ENST00000390922 122 ntBASIC0.61□□□□□ -2.31
UBE3BQ7Z3V4 RNU7-171P-201ENST00000459581 62 ntBASIC0.61□□□□□ -2.31
UBE3BQ7Z3V4 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
UBE3BQ7Z3V4 RNU6-624P-201ENST00000363411 107 ntBASIC0.6□□□□□ -2.31
UBE3BQ7Z3V4 RNU1-141P-201ENST00000364623 158 ntBASIC0.6□□□□□ -2.31
UBE3BQ7Z3V4 RNY4P3-201ENST00000365254 95 ntBASIC0.6□□□□□ -2.31
UBE3BQ7Z3V4 SNORD90-201ENST00000391145 111 ntBASIC0.6□□□□□ -2.31
UBE3BQ7Z3V4 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
UBE3BQ7Z3V4 RNA5SP457-201ENST00000363657 124 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 SNORA24B-201ENST00000384176 131 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 RNU2-59P-201ENST00000410482 191 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 Y_RNA.607-201ENST00000410597 98 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 AC114737.2-201ENST00000421583 173 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 RNU1-29P-201ENST00000606574 126 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
UBE3BQ7Z3V4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 Y_RNA.388-201ENST00000383919 113 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 AC069271.1-201ENST00000445577 156 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-848P-201ENST00000515948 107 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-617P-201ENST00000516147 107 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-473P-201ENST00000516164 107 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 MIR548O2-201ENST00000616090 70 ntBASIC0.58□□□□□ -2.32
UBE3BQ7Z3V4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
UBE3BQ7Z3V4 RNA5SP484-201ENST00000458857 111 ntBASIC0.57□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-863P-201ENST00000515989 104 ntBASIC0.57□□□□□ -2.32
UBE3BQ7Z3V4 MIR3140-201ENST00000583685 90 ntBASIC0.57□□□□□ -2.32
UBE3BQ7Z3V4 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
UBE3BQ7Z3V4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.56□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-1276P-201ENST00000365372 104 ntBASIC0.56□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-242P-201ENST00000384359 107 ntBASIC0.56□□□□□ -2.32
UBE3BQ7Z3V4 MT-TY-201ENST00000387409 66 ntBASIC0.56□□□□□ -2.32
UBE3BQ7Z3V4 FGF7P7-201ENST00000514120 227 ntBASIC0.56□□□□□ -2.32
UBE3BQ7Z3V4 MIR5706-201ENST00000579841 80 ntBASIC0.56□□□□□ -2.32
UBE3BQ7Z3V4 RNU5F-1-201ENST00000362507 117 ntBASIC0.55□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-557P-201ENST00000516842 110 ntBASIC0.55□□□□□ -2.32
UBE3BQ7Z3V4 AC069503.3-201ENST00000618674 145 ntBASIC0.55□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-592P-201ENST00000411333 103 ntBASIC0.54□□□□□ -2.32
UBE3BQ7Z3V4 NAMPTP3-201ENST00000569273 224 ntBASIC0.54□□□□□ -2.32
UBE3BQ7Z3V4 MIR4460-201ENST00000577862 86 ntBASIC0.54□□□□□ -2.32
UBE3BQ7Z3V4 MIR4752-201ENST00000579672 72 ntBASIC0.54□□□□□ -2.32
UBE3BQ7Z3V4 MIR8087-201ENST00000612745 78 ntBASIC0.54□□□□□ -2.32
UBE3BQ7Z3V4 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-1052P-201ENST00000411398 104 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 RNU6-719P-201ENST00000516671 104 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 MIR4666B-201ENST00000578142 81 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 SNORA70.25-201ENST00000612741 95 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 MIR6755-201ENST00000619993 66 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
UBE3BQ7Z3V4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.52□□□□□ -2.33
UBE3BQ7Z3V4 snoU13.17-201ENST00000458802 104 ntBASIC0.52□□□□□ -2.33
UBE3BQ7Z3V4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.52□□□□□ -2.33
UBE3BQ7Z3V4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.52□□□□□ -2.33
UBE3BQ7Z3V4 SNORA72.7-201ENST00000516349 94 ntBASIC0.52□□□□□ -2.33
UBE3BQ7Z3V4 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
UBE3BQ7Z3V4 RNA5SP173-201ENST00000364857 136 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 318.7 ms