Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.64□□□□□ -2.67
SSX9Q7RTT3 SNORA63.6-201ENST00000364921 119 ntBASIC-1.64□□□□□ -2.67
SSX9Q7RTT3 RNA5SP136-201ENST00000410906 107 ntBASIC-1.64□□□□□ -2.67
SSX9Q7RTT3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.64□□□□□ -2.67
SSX9Q7RTT3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.64□□□□□ -2.67
SSX9Q7RTT3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.65□□□□□ -2.67
SSX9Q7RTT3 RNU6-915P-201ENST00000364943 103 ntBASIC-1.65□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.65□□□□□ -2.67
SSX9Q7RTT3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.65□□□□□ -2.67
SSX9Q7RTT3 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.66□□□□□ -2.68
SSX9Q7RTT3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.66□□□□□ -2.68
SSX9Q7RTT3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.66□□□□□ -2.68
SSX9Q7RTT3 AL117187.1-201ENST00000555482 181 ntBASIC-1.66□□□□□ -2.68
SSX9Q7RTT3 MIR3128-201ENST00000581957 66 ntBASIC-1.66□□□□□ -2.68
SSX9Q7RTT3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.66□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.67□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.67□□□□□ -2.68
SSX9Q7RTT3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.67□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.67□□□□□ -2.68
SSX9Q7RTT3 RNU6-460P-201ENST00000391158 108 ntBASIC-1.67□□□□□ -2.68
SSX9Q7RTT3 RNU4-11P-201ENST00000365287 132 ntBASIC-1.68□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.68□□□□□ -2.68
SSX9Q7RTT3 MIR124-2-201ENST00000385081 109 ntBASIC-1.68□□□□□ -2.68
SSX9Q7RTT3 RNU6-111P-201ENST00000517179 105 ntBASIC-1.68□□□□□ -2.68
SSX9Q7RTT3 AC025521.1-201ENST00000621624 286 ntBASIC-1.68□□□□□ -2.68
SSX9Q7RTT3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.68□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.69□□□□□ -2.68
SSX9Q7RTT3 RNU6-647P-201ENST00000364243 107 ntBASIC-1.69□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.69□□□□□ -2.68
SSX9Q7RTT3 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.7□□□□□ -2.68
SSX9Q7RTT3 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.7□□□□□ -2.68
SSX9Q7RTT3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.7□□□□□ -2.68
SSX9Q7RTT3 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.7□□□□□ -2.68
SSX9Q7RTT3 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.7□□□□□ -2.68
SSX9Q7RTT3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.7□□□□□ -2.68
SSX9Q7RTT3 AC138207.3-201ENST00000585289 166 ntBASIC-1.71□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 RNU6-816P-201ENST00000390914 107 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 RNU7-197P-201ENST00000458836 62 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 AC008737.2-201ENST00000599446 118 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 AC132825.6-201ENST00000638861 357 ntBASIC-1.72□□□□□ -2.68
SSX9Q7RTT3 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.73□□□□□ -2.69
SSX9Q7RTT3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.73□□□□□ -2.69
SSX9Q7RTT3 SNORA20.1-201ENST00000364790 130 ntBASIC-1.73□□□□□ -2.69
SSX9Q7RTT3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.73□□□□□ -2.69
SSX9Q7RTT3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.73□□□□□ -2.69
SSX9Q7RTT3 RNY4P6-201ENST00000363667 96 ntBASIC-1.74□□□□□ -2.69
SSX9Q7RTT3 SNORD50.2-201ENST00000365465 70 ntBASIC-1.74□□□□□ -2.69
SSX9Q7RTT3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.74□□□□□ -2.69
SSX9Q7RTT3 AC021146.9-201ENST00000512503 156 ntBASIC-1.74□□□□□ -2.69
SSX9Q7RTT3 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.74□□□□□ -2.69
SSX9Q7RTT3 U6.96-201ENST00000636425 70 ntBASIC-1.74□□□□□ -2.69
SSX9Q7RTT3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.75□□□□□ -2.69
SSX9Q7RTT3 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.75□□□□□ -2.69
SSX9Q7RTT3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
SSX9Q7RTT3 AC072026.1-201ENST00000605023 201 ntBASIC-1.75□□□□□ -2.69
SSX9Q7RTT3 MIR365A-201ENST00000362260 87 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 RNU6-208P-201ENST00000362431 107 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 RNU7-85P-201ENST00000458851 63 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 MIR3140-201ENST00000583685 90 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 AC141273.2-201ENST00000618989 130 ntBASIC-1.76□□□□□ -2.69
SSX9Q7RTT3 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.77□□□□□ -2.69
SSX9Q7RTT3 RNU6-132P-201ENST00000383863 107 ntBASIC-1.77□□□□□ -2.69
SSX9Q7RTT3 RNU6-151P-201ENST00000364158 107 ntBASIC-1.78□□□□□ -2.69
SSX9Q7RTT3 RNU6-867P-201ENST00000364956 107 ntBASIC-1.78□□□□□ -2.69
SSX9Q7RTT3 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.78□□□□□ -2.69
SSX9Q7RTT3 RNU6-781P-201ENST00000516377 101 ntBASIC-1.78□□□□□ -2.69
SSX9Q7RTT3 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.79□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.79□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.79□□□□□ -2.7
SSX9Q7RTT3 MIR606-201ENST00000384851 96 ntBASIC-1.79□□□□□ -2.7
SSX9Q7RTT3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.79□□□□□ -2.7
SSX9Q7RTT3 AC062037.2-201ENST00000610137 73 ntBASIC-1.79□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 MIR577-201ENST00000385196 96 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 MIR548U-201ENST00000390728 81 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 HLA-S-202ENST00000425174 53 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 AL513043.2-201ENST00000573941 143 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 MIR4441-201ENST00000582623 100 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 U4.2-201ENST00000618561 85 ntBASIC-1.8□□□□□ -2.7
SSX9Q7RTT3 MIR513C-201ENST00000401352 84 ntBASIC-1.81□□□□□ -2.7
SSX9Q7RTT3 AC026421.1-201ENST00000519101 163 ntBASIC-1.81□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.82□□□□□ -2.7
SSX9Q7RTT3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.82□□□□□ -2.7
SSX9Q7RTT3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.82□□□□□ -2.7
SSX9Q7RTT3 MIR1302-3-201ENST00000408128 138 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms