Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 RNU6-219P-201ENST00000364728 107 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 RNU6-294P-201ENST00000364999 102 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 Y_RNA.374-201ENST00000365606 101 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 MIR519C-201ENST00000385053 87 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 RNA5SP484-201ENST00000458857 111 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
SSRP1Q08945 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.59□□□□□ -2.31
SSRP1Q08945 MIRLET7D-201ENST00000362263 87 ntBASIC0.58□□□□□ -2.32
SSRP1Q08945 Y_RNA.30-201ENST00000362572 97 ntBASIC0.58□□□□□ -2.32
SSRP1Q08945 SNORD115-27-201ENST00000364430 82 ntBASIC0.58□□□□□ -2.32
SSRP1Q08945 AC093423.1-201ENST00000440817 142 ntBASIC0.58□□□□□ -2.32
SSRP1Q08945 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
SSRP1Q08945 Y_RNA.17-201ENST00000362433 111 ntBASIC0.57□□□□□ -2.32
SSRP1Q08945 RNU6-848P-201ENST00000515948 107 ntBASIC0.57□□□□□ -2.32
SSRP1Q08945 RNU6-617P-201ENST00000516147 107 ntBASIC0.57□□□□□ -2.32
SSRP1Q08945 RNU6-473P-201ENST00000516164 107 ntBASIC0.57□□□□□ -2.32
SSRP1Q08945 RNU6-1049P-201ENST00000516414 107 ntBASIC0.57□□□□□ -2.32
SSRP1Q08945 Y_RNA.423-201ENST00000384057 113 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 RNU6-675P-201ENST00000384236 104 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 U3.27-201ENST00000391237 200 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 AC006210.1-201ENST00000424882 111 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 NAMPTP3-201ENST00000569273 224 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 MIR5706-201ENST00000579841 80 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 MIR924-201ENST00000638017 53 ntBASIC0.56□□□□□ -2.32
SSRP1Q08945 Y_RNA.43-201ENST00000362670 111 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 SNORA2A-201ENST00000383885 135 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 Y_RNA.558-201ENST00000384685 113 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 RNU6-267P-201ENST00000516714 103 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 RNA5SP330-201ENST00000517096 96 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 MIR4460-201ENST00000577862 86 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 MIR4796-201ENST00000580742 81 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 SNORA70.25-201ENST00000612741 95 ntBASIC0.55□□□□□ -2.32
SSRP1Q08945 Y_RNA.115-201ENST00000363272 98 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 RNU6-1255P-201ENST00000363434 112 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 RNA5SP457-201ENST00000363657 124 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 SNORD110-201ENST00000408189 75 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 Y_RNA.593-201ENST00000410292 98 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 FGF7P7-201ENST00000514120 227 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
SSRP1Q08945 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SSRP1Q08945 MIR103A1-201ENST00000362165 78 ntBASIC0.53□□□□□ -2.32
SSRP1Q08945 SNORD115-37-201ENST00000363768 82 ntBASIC0.53□□□□□ -2.32
SSRP1Q08945 Y_RNA.258-201ENST00000364613 105 ntBASIC0.53□□□□□ -2.32
SSRP1Q08945 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
SSRP1Q08945 AC069503.3-201ENST00000618674 145 ntBASIC0.53□□□□□ -2.32
SSRP1Q08945 SNORA63.2-201ENST00000362603 126 ntBASIC0.52□□□□□ -2.33
SSRP1Q08945 RNY4P3-201ENST00000365254 95 ntBASIC0.52□□□□□ -2.33
SSRP1Q08945 RNU6-497P-201ENST00000365316 104 ntBASIC0.52□□□□□ -2.33
SSRP1Q08945 RNU6-1051P-201ENST00000365471 102 ntBASIC0.52□□□□□ -2.33
SSRP1Q08945 RNU7-153P-201ENST00000516455 62 ntBASIC0.52□□□□□ -2.33
SSRP1Q08945 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
SSRP1Q08945 MT-TY-201ENST00000387409 66 ntBASIC0.51□□□□□ -2.33
SSRP1Q08945 U7.6-201ENST00000610841 64 ntBASIC0.51□□□□□ -2.33
SSRP1Q08945 MIR8087-201ENST00000612745 78 ntBASIC0.51□□□□□ -2.33
SSRP1Q08945 IGLL4P-201ENST00000614590 133 ntBASIC0.51□□□□□ -2.33
SSRP1Q08945 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
SSRP1Q08945 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
SSRP1Q08945 MIR548O2-201ENST00000616090 70 ntBASIC0.5□□□□□ -2.33
SSRP1Q08945 MIR760-201ENST00000390220 80 ntBASIC0.49□□□□□ -2.33
SSRP1Q08945 RNU6-1052P-201ENST00000411398 104 ntBASIC0.49□□□□□ -2.33
SSRP1Q08945 RNU6-719P-201ENST00000516671 104 ntBASIC0.49□□□□□ -2.33
SSRP1Q08945 AC006254.2-201ENST00000603259 279 ntBASIC0.49□□□□□ -2.33
SSRP1Q08945 MIR548BB-201ENST00000626714 66 ntBASIC0.49□□□□□ -2.33
SSRP1Q08945 MIR330-201ENST00000362196 94 ntBASIC0.48□□□□□ -2.33
SSRP1Q08945 RNY1P1-201ENST00000364372 112 ntBASIC0.48□□□□□ -2.33
SSRP1Q08945 AC093729.1-201ENST00000513074 128 ntBASIC0.48□□□□□ -2.33
SSRP1Q08945 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.48□□□□□ -2.33
SSRP1Q08945 MIR3140-201ENST00000583685 90 ntBASIC0.48□□□□□ -2.33
SSRP1Q08945 RNU5F-1-201ENST00000362507 117 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 MIR450A2-201ENST00000385022 100 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 Y_RNA.611-201ENST00000410682 108 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 YWHAEP2-201ENST00000580066 112 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
SSRP1Q08945 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
SSRP1Q08945 RNA5SP62-201ENST00000363457 110 ntBASIC0.46□□□□□ -2.34
SSRP1Q08945 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
SSRP1Q08945 SNORD90-201ENST00000391145 111 ntBASIC0.46□□□□□ -2.34
SSRP1Q08945 MIR1197-201ENST00000408818 88 ntBASIC0.46□□□□□ -2.34
SSRP1Q08945 RNA5SP128-201ENST00000365305 116 ntBASIC0.45□□□□□ -2.34
SSRP1Q08945 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
SSRP1Q08945 AC073261.1-201ENST00000429409 121 ntBASIC0.45□□□□□ -2.34
SSRP1Q08945 SNORA25.13-201ENST00000516395 103 ntBASIC0.45□□□□□ -2.34
SSRP1Q08945 SNORA9.1-201ENST00000362412 131 ntBASIC0.44□□□□□ -2.34
SSRP1Q08945 RNU6V-201ENST00000384105 107 ntBASIC0.44□□□□□ -2.34
SSRP1Q08945 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
SSRP1Q08945 SNORA24B-201ENST00000384176 131 ntBASIC0.43□□□□□ -2.34
SSRP1Q08945 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.43□□□□□ -2.34
SSRP1Q08945 RNU7-129P-201ENST00000516128 62 ntBASIC0.43□□□□□ -2.34
SSRP1Q08945 RNU6-1232P-201ENST00000516299 86 ntBASIC0.43□□□□□ -2.34
SSRP1Q08945 RNU5B-6P-201ENST00000516765 68 ntBASIC0.43□□□□□ -2.34
SSRP1Q08945 Y_RNA.73-201ENST00000362910 113 ntBASIC0.42□□□□□ -2.34
SSRP1Q08945 Y_RNA.125-201ENST00000363371 111 ntBASIC0.42□□□□□ -2.34
SSRP1Q08945 HMGN2P22-201ENST00000427588 175 ntBASIC0.42□□□□□ -2.34
SSRP1Q08945 MIR4473-201ENST00000583731 91 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 383.8 ms