Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AL442128.1-201ENST00000615151 90 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-643P-201ENST00000384018 107 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-630P-201ENST00000391258 106 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 AC090616.4-201ENST00000448026 115 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-507P-201ENST00000516045 100 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU7-121P-201ENST00000516604 62 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 MIR3123-201ENST00000583417 75 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 DEFB117-201ENST00000602356 141 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 AL137067.1-201ENST00000615933 120 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-483P-201ENST00000384088 108 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-890P-201ENST00000384121 107 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-816P-201ENST00000390914 107 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 AL035461.1-201ENST00000421490 332 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 MTND3P2-201ENST00000438452 342 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 MTND5P22-201ENST00000458380 195 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU7-154P-201ENST00000516194 62 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU4-71P-201ENST00000516258 113 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 RNU6-656P-201ENST00000516785 107 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 AC109635.3-201ENST00000529536 185 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 AC130289.1-201ENST00000577321 73 ntBASIC-0.43□□□□□ -2.48
COL7A1Q02388 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.43□□□□□ -2.48
COL7A1Q02388 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-978P-201ENST00000364371 103 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MIR577-201ENST00000385196 96 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-129P-201ENST00000391022 107 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-584P-201ENST00000410350 95 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MTND2P23-201ENST00000422990 651 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AL118496.2-201ENST00000448300 230 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU7-85P-201ENST00000458851 63 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-976P-201ENST00000516086 111 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AC113195.1-201ENST00000579952 141 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AC037487.3-201ENST00000606668 112 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AC025253.1-201ENST00000613623 543 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MIR5683-201ENST00000636514 76 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-363P-201ENST00000362895 105 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 SNORD115-22-201ENST00000364456 82 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 SNORD45B-201ENST00000364617 72 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-645P-201ENST00000364649 106 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU4-11P-201ENST00000365287 132 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-768P-201ENST00000384683 107 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-21P-201ENST00000384710 107 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 SNORD113-2-201ENST00000391082 72 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-695P-201ENST00000391157 104 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-381P-201ENST00000391259 108 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU4-69P-201ENST00000410677 143 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU4-88P-201ENST00000411220 86 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RBMX2P4-201ENST00000441256 376 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU7-6P-201ENST00000516845 62 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AC025166.1-201ENST00000612411 163 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Z99129.1-201ENST00000612510 255 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AC090971.5-201ENST00000621102 293 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MIR6874-201ENST00000635894 71 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-888P-201ENST00000363010 101 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 SNORD1B-201ENST00000363091 84 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 SNORD38.1-201ENST00000363863 68 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MIR520D-201ENST00000385002 87 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AL021921.1-201ENST00000442774 93 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AC069439.1-201ENST00000494739 167 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MIR5693-201ENST00000577722 73 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 AL603755.1-201ENST00000619504 163 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 MIR3658-201ENST00000636291 56 ntBASIC-0.44□□□□□ -2.48
COL7A1Q02388 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU4-90P-201ENST00000362773 141 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms