Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SNORD114-4-201ENST00000363962 75 ntBASIC1.98□□□□□ -2.09
SMPD1P17405 MT-TY-201ENST00000387409 66 ntBASIC1.98□□□□□ -2.09
SMPD1P17405 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
SMPD1P17405 AL591704.2-201ENST00000421658 181 ntBASIC1.98□□□□□ -2.09
SMPD1P17405 AL512310.8-201ENST00000550183 120 ntBASIC1.98□□□□□ -2.09
SMPD1P17405 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
SMPD1P17405 MIR100-201ENST00000385259 80 ntBASIC1.97□□□□□ -2.09
SMPD1P17405 SNORA67.5-201ENST00000391036 107 ntBASIC1.97□□□□□ -2.09
SMPD1P17405 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
SMPD1P17405 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
SMPD1P17405 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
SMPD1P17405 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
SMPD1P17405 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
SMPD1P17405 SNORA31.2-201ENST00000516019 134 ntBASIC1.96□□□□□ -2.1
SMPD1P17405 RNU7-174P-201ENST00000516248 59 ntBASIC1.96□□□□□ -2.1
SMPD1P17405 MIR4460-201ENST00000577862 86 ntBASIC1.96□□□□□ -2.1
SMPD1P17405 BX248123.2-201ENST00000606318 124 ntBASIC1.96□□□□□ -2.1
SMPD1P17405 MIR1-1-201ENST00000362147 71 ntBASIC1.95□□□□□ -2.1
SMPD1P17405 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
SMPD1P17405 RNU7-119P-201ENST00000459279 63 ntBASIC1.95□□□□□ -2.1
SMPD1P17405 RNU7-21P-201ENST00000459430 62 ntBASIC1.95□□□□□ -2.1
SMPD1P17405 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
SMPD1P17405 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 Y_RNA.363-201ENST00000365529 113 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 MIR520F-201ENST00000384824 87 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 SNORD41.1-201ENST00000391000 69 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 AC021146.9-201ENST00000512503 156 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 AL136317.1-201ENST00000612653 226 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 U2.7-201ENST00000619197 100 ntBASIC1.94□□□□□ -2.1
SMPD1P17405 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.93□□□□□ -2.1
SMPD1P17405 RNA5SP325-201ENST00000363756 130 ntBASIC1.93□□□□□ -2.1
SMPD1P17405 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.93□□□□□ -2.1
SMPD1P17405 RNU6-135P-201ENST00000516769 101 ntBASIC1.93□□□□□ -2.1
SMPD1P17405 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
SMPD1P17405 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
SMPD1P17405 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
SMPD1P17405 U4.4-201ENST00000620626 117 ntBASIC1.93□□□□□ -2.1
SMPD1P17405 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMPD1P17405 RN7SKP88-201ENST00000516847 250 ntBASIC1.92□□□□□ -2.1
SMPD1P17405 RNU6-980P-201ENST00000516925 103 ntBASIC1.92□□□□□ -2.1
SMPD1P17405 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
SMPD1P17405 7SK.8-201ENST00000612110 250 ntBASIC1.92□□□□□ -2.1
SMPD1P17405 7SK.11-201ENST00000615477 250 ntBASIC1.92□□□□□ -2.1
SMPD1P17405 7SK.13-201ENST00000622040 250 ntBASIC1.92□□□□□ -2.1
SMPD1P17405 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
SMPD1P17405 SNORA80D-201ENST00000384488 135 ntBASIC1.91□□□□□ -2.1
SMPD1P17405 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
SMPD1P17405 snoU13.13-201ENST00000458842 104 ntBASIC1.91□□□□□ -2.1
SMPD1P17405 RNU7-90P-201ENST00000459216 62 ntBASIC1.91□□□□□ -2.1
SMPD1P17405 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SMPD1P17405 SNORA15B-2-201ENST00000384058 135 ntBASIC1.9□□□□□ -2.11
SMPD1P17405 RNU6-42P-201ENST00000384165 107 ntBASIC1.9□□□□□ -2.11
SMPD1P17405 SNORA15B-1-201ENST00000384334 135 ntBASIC1.9□□□□□ -2.11
SMPD1P17405 MIR4639-201ENST00000584938 69 ntBASIC1.9□□□□□ -2.11
SMPD1P17405 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.9□□□□□ -2.11
SMPD1P17405 RNU1-141P-201ENST00000364623 158 ntBASIC1.89□□□□□ -2.11
SMPD1P17405 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMPD1P17405 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMPD1P17405 MIR1276-201ENST00000408707 83 ntBASIC1.89□□□□□ -2.11
SMPD1P17405 MIR6504-201ENST00000613520 61 ntBASIC1.89□□□□□ -2.11
SMPD1P17405 SNORA7.1-201ENST00000363750 139 ntBASIC1.88□□□□□ -2.11
SMPD1P17405 MIR548L-201ENST00000408303 86 ntBASIC1.88□□□□□ -2.11
SMPD1P17405 RNU7-95P-201ENST00000459222 64 ntBASIC1.88□□□□□ -2.11
SMPD1P17405 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
SMPD1P17405 AC244669.1-204ENST00000621564 178 ntBASIC1.88□□□□□ -2.11
SMPD1P17405 MIR644A-201ENST00000385262 94 ntBASIC1.87□□□□□ -2.11
SMPD1P17405 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
SMPD1P17405 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.87□□□□□ -2.11
SMPD1P17405 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
SMPD1P17405 SNORD28-201ENST00000384706 75 ntBASIC1.86□□□□□ -2.11
SMPD1P17405 MIR1827-201ENST00000408549 66 ntBASIC1.86□□□□□ -2.11
SMPD1P17405 Y_RNA.633-201ENST00000459107 95 ntBASIC1.86□□□□□ -2.11
SMPD1P17405 AC002350.1-201ENST00000490759 375 ntBASIC1.86□□□□□ -2.11
SMPD1P17405 RMST_2.1-201ENST00000617263 136 ntBASIC1.86□□□□□ -2.11
SMPD1P17405 MIR6779-201ENST00000617283 64 ntBASIC1.86□□□□□ -2.11
SMPD1P17405 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMPD1P17405 Y_RNA.125-201ENST00000363371 111 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 RNU6-35P-201ENST00000384530 107 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 RNU6-910P-201ENST00000390844 107 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 RNU6-469P-201ENST00000516253 101 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 RNU5B-6P-201ENST00000516765 68 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 MIR6734-201ENST00000621166 68 ntBASIC1.85□□□□□ -2.11
SMPD1P17405 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SMPD1P17405 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SMPD1P17405 SNORD114-26-201ENST00000363543 72 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 RNU4-33P-201ENST00000364316 85 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 SNORA41B-201ENST00000384785 128 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 RNU6-930P-201ENST00000390938 100 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 SNORD79.1-201ENST00000516069 84 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 RNU6-231P-201ENST00000517122 103 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.84□□□□□ -2.11
SMPD1P17405 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.84□□□□□ -2.11
SMPD1P17405 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMPD1P17405 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
SMPD1P17405 Y_RNA.246-201ENST00000364495 108 ntBASIC1.83□□□□□ -2.12
SMPD1P17405 RNU6-726P-201ENST00000364680 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms