Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC002429.1-201ENST00000437672 148 ntBASIC1.6□□□□□ -2.15
BMP4P12644 RNU6-135P-201ENST00000516769 101 ntBASIC1.6□□□□□ -2.15
BMP4P12644 MIR4460-201ENST00000577862 86 ntBASIC1.6□□□□□ -2.15
BMP4P12644 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
BMP4P12644 MIR764-201ENST00000390811 85 ntBASIC1.59□□□□□ -2.15
BMP4P12644 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.59□□□□□ -2.15
BMP4P12644 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
BMP4P12644 RNU6-726P-201ENST00000364680 107 ntBASIC1.58□□□□□ -2.16
BMP4P12644 SNORA75.1-201ENST00000391130 148 ntBASIC1.58□□□□□ -2.16
BMP4P12644 RNU6-122P-201ENST00000516818 107 ntBASIC1.58□□□□□ -2.16
BMP4P12644 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
BMP4P12644 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
BMP4P12644 SNORD18A-201ENST00000363753 72 ntBASIC1.57□□□□□ -2.16
BMP4P12644 RNA5SP99-201ENST00000364020 114 ntBASIC1.57□□□□□ -2.16
BMP4P12644 RNU1-141P-201ENST00000364623 158 ntBASIC1.57□□□□□ -2.16
BMP4P12644 RNU6-1335P-201ENST00000365426 107 ntBASIC1.57□□□□□ -2.16
BMP4P12644 SNORD113-4-201ENST00000364802 75 ntBASIC1.56□□□□□ -2.16
BMP4P12644 RNA5SP47-201ENST00000517230 109 ntBASIC1.56□□□□□ -2.16
BMP4P12644 MIR548V-201ENST00000584165 80 ntBASIC1.56□□□□□ -2.16
BMP4P12644 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
BMP4P12644 MIR7978-201ENST00000636158 59 ntBASIC1.56□□□□□ -2.16
BMP4P12644 MIR548L-201ENST00000408303 86 ntBASIC1.55□□□□□ -2.16
BMP4P12644 AL157398.1-201ENST00000452981 186 ntBASIC1.55□□□□□ -2.16
BMP4P12644 RNU6-469P-201ENST00000516253 101 ntBASIC1.55□□□□□ -2.16
BMP4P12644 RNU5B-6P-201ENST00000516765 68 ntBASIC1.55□□□□□ -2.16
BMP4P12644 AC018659.1-201ENST00000551083 169 ntBASIC1.55□□□□□ -2.16
BMP4P12644 RNU6-92P-201ENST00000605893 104 ntBASIC1.55□□□□□ -2.16
BMP4P12644 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
BMP4P12644 RNU6-716P-201ENST00000365621 103 ntBASIC1.54□□□□□ -2.16
BMP4P12644 SNORD89-201ENST00000390981 114 ntBASIC1.54□□□□□ -2.16
BMP4P12644 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
BMP4P12644 MIR3938-201ENST00000582157 103 ntBASIC1.54□□□□□ -2.16
BMP4P12644 SNORD60.1-201ENST00000362451 73 ntBASIC1.53□□□□□ -2.16
BMP4P12644 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
BMP4P12644 MIR222-201ENST00000384992 110 ntBASIC1.53□□□□□ -2.16
BMP4P12644 SNORD105-201ENST00000386910 85 ntBASIC1.53□□□□□ -2.16
BMP4P12644 RNU6-269P-201ENST00000391077 97 ntBASIC1.53□□□□□ -2.16
BMP4P12644 snoU13.13-201ENST00000458842 104 ntBASIC1.53□□□□□ -2.16
BMP4P12644 RNU6-1110P-201ENST00000516462 101 ntBASIC1.53□□□□□ -2.16
BMP4P12644 RNU1-17P-201ENST00000363022 152 ntBASIC1.52□□□□□ -2.17
BMP4P12644 Y_RNA.250-201ENST00000364542 110 ntBASIC1.52□□□□□ -2.17
BMP4P12644 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
BMP4P12644 RNU6-302P-201ENST00000365249 107 ntBASIC1.52□□□□□ -2.17
BMP4P12644 MIR521-2-201ENST00000384818 87 ntBASIC1.51□□□□□ -2.17
BMP4P12644 AC003989.2-201ENST00000440224 169 ntBASIC1.51□□□□□ -2.17
BMP4P12644 RNA5SP484-201ENST00000458857 111 ntBASIC1.51□□□□□ -2.17
BMP4P12644 Y_RNA.722-201ENST00000517279 114 ntBASIC1.51□□□□□ -2.17
BMP4P12644 MIR3678-201ENST00000578455 94 ntBASIC1.51□□□□□ -2.17
BMP4P12644 SNORA8.2-201ENST00000384372 139 ntBASIC1.5□□□□□ -2.17
BMP4P12644 SNORA25-201ENST00000384384 134 ntBASIC1.5□□□□□ -2.17
BMP4P12644 RNU6-1162P-201ENST00000384443 104 ntBASIC1.5□□□□□ -2.17
BMP4P12644 MIR630-201ENST00000384957 97 ntBASIC1.5□□□□□ -2.17
BMP4P12644 MIR9-3-201ENST00000385084 90 ntBASIC1.5□□□□□ -2.17
BMP4P12644 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
BMP4P12644 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
BMP4P12644 RNA5SP327-201ENST00000362494 101 ntBASIC1.49□□□□□ -2.17
BMP4P12644 SNORD114-4-201ENST00000363962 75 ntBASIC1.49□□□□□ -2.17
BMP4P12644 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
BMP4P12644 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
BMP4P12644 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
BMP4P12644 MIR548C-201ENST00000384815 97 ntBASIC1.48□□□□□ -2.17
BMP4P12644 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
BMP4P12644 SCARNA16.5-201ENST00000517114 183 ntBASIC1.48□□□□□ -2.17
BMP4P12644 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.48□□□□□ -2.17
BMP4P12644 RNU6-936P-201ENST00000384005 107 ntBASIC1.47□□□□□ -2.17
BMP4P12644 MIR573-201ENST00000384964 99 ntBASIC1.47□□□□□ -2.17
BMP4P12644 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
BMP4P12644 U7.7-201ENST00000459276 60 ntBASIC1.47□□□□□ -2.17
BMP4P12644 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.47□□□□□ -2.17
BMP4P12644 MIR3612-201ENST00000579753 87 ntBASIC1.47□□□□□ -2.17
BMP4P12644 U2.7-201ENST00000619197 100 ntBASIC1.47□□□□□ -2.17
BMP4P12644 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
BMP4P12644 Y_RNA.338-201ENST00000365320 114 ntBASIC1.46□□□□□ -2.18
BMP4P12644 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
BMP4P12644 Y_RNA.633-201ENST00000459107 95 ntBASIC1.46□□□□□ -2.18
BMP4P12644 AC021146.9-201ENST00000512503 156 ntBASIC1.46□□□□□ -2.18
BMP4P12644 RNU7-174P-201ENST00000516248 59 ntBASIC1.46□□□□□ -2.18
BMP4P12644 AL162376.1-201ENST00000624117 175 ntBASIC1.46□□□□□ -2.18
BMP4P12644 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
BMP4P12644 FABP5P4-201ENST00000437203 171 ntBASIC1.45□□□□□ -2.18
BMP4P12644 AL603825.1-201ENST00000438481 80 ntBASIC1.45□□□□□ -2.18
BMP4P12644 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.45□□□□□ -2.18
BMP4P12644 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
BMP4P12644 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
BMP4P12644 SNORA33.1-201ENST00000364957 130 ntBASIC1.44□□□□□ -2.18
BMP4P12644 SNORD13-201ENST00000459299 104 ntBASIC1.44□□□□□ -2.18
BMP4P12644 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
BMP4P12644 MIR8081-201ENST00000611533 95 ntBASIC1.44□□□□□ -2.18
BMP4P12644 U4.4-201ENST00000620626 117 ntBASIC1.44□□□□□ -2.18
BMP4P12644 MIR6828-201ENST00000636181 60 ntBASIC1.44□□□□□ -2.18
BMP4P12644 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
BMP4P12644 RNU6-698P-201ENST00000363523 107 ntBASIC1.43□□□□□ -2.18
BMP4P12644 RNU6-34P-201ENST00000364874 107 ntBASIC1.43□□□□□ -2.18
BMP4P12644 RNU6-1184P-201ENST00000384588 108 ntBASIC1.43□□□□□ -2.18
BMP4P12644 MIR517B-201ENST00000385102 67 ntBASIC1.43□□□□□ -2.18
BMP4P12644 RNU6-808P-201ENST00000391233 108 ntBASIC1.43□□□□□ -2.18
BMP4P12644 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
BMP4P12644 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
BMP4P12644 MIR652-201ENST00000385278 98 ntBASIC1.42□□□□□ -2.18
BMP4P12644 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms