Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNA5SP227-201ENST00000516184 113 ntBASIC0.69□□□□□ -2.3
RHOP08100 RNU7-153P-201ENST00000516455 62 ntBASIC0.69□□□□□ -2.3
RHOP08100 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.69□□□□□ -2.3
RHOP08100 AL162376.1-201ENST00000624117 175 ntBASIC0.69□□□□□ -2.3
RHOP08100 Y_RNA.388-201ENST00000383919 113 ntBASIC0.68□□□□□ -2.3
RHOP08100 MIR548L-201ENST00000408303 86 ntBASIC0.68□□□□□ -2.3
RHOP08100 AC140658.3-201ENST00000567603 271 ntBASIC0.68□□□□□ -2.3
RHOP08100 MIR7107-201ENST00000611489 80 ntBASIC0.68□□□□□ -2.3
RHOP08100 RNA5SP517-201ENST00000364724 117 ntBASIC0.67□□□□□ -2.3
RHOP08100 RNU6-716P-201ENST00000365621 103 ntBASIC0.67□□□□□ -2.3
RHOP08100 RNU6-242P-201ENST00000384359 107 ntBASIC0.67□□□□□ -2.3
RHOP08100 MIR451A-201ENST00000385059 72 ntBASIC0.67□□□□□ -2.3
RHOP08100 MIR519E-201ENST00000385075 84 ntBASIC0.67□□□□□ -2.3
RHOP08100 MIR216B-201ENST00000390186 82 ntBASIC0.67□□□□□ -2.3
RHOP08100 Y_RNA.607-201ENST00000410597 98 ntBASIC0.67□□□□□ -2.3
RHOP08100 RNU6-1057P-201ENST00000517162 102 ntBASIC0.67□□□□□ -2.3
RHOP08100 AC010487.4-201ENST00000637027 61 ntBASIC0.67□□□□□ -2.3
RHOP08100 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RHOP08100 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
RHOP08100 U3.27-201ENST00000391237 200 ntBASIC0.66□□□□□ -2.3
RHOP08100 SNORA25.13-201ENST00000516395 103 ntBASIC0.66□□□□□ -2.3
RHOP08100 AC092634.7-201ENST00000621022 103 ntBASIC0.66□□□□□ -2.3
RHOP08100 SNORA63.2-201ENST00000362603 126 ntBASIC0.65□□□□□ -2.31
RHOP08100 RNU6-1276P-201ENST00000365372 104 ntBASIC0.65□□□□□ -2.31
RHOP08100 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
RHOP08100 RNU6-624P-201ENST00000363411 107 ntBASIC0.64□□□□□ -2.31
RHOP08100 RNU6-1051P-201ENST00000365471 102 ntBASIC0.64□□□□□ -2.31
RHOP08100 Y_RNA.374-201ENST00000365606 101 ntBASIC0.64□□□□□ -2.31
RHOP08100 AC093423.1-201ENST00000440817 142 ntBASIC0.64□□□□□ -2.31
RHOP08100 FGF7P7-201ENST00000514120 227 ntBASIC0.64□□□□□ -2.31
RHOP08100 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
RHOP08100 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
RHOP08100 RNY4P3-201ENST00000365254 95 ntBASIC0.63□□□□□ -2.31
RHOP08100 RNU6-269P-201ENST00000391077 97 ntBASIC0.63□□□□□ -2.31
RHOP08100 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
RHOP08100 RNU6-592P-201ENST00000411333 103 ntBASIC0.63□□□□□ -2.31
RHOP08100 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.63□□□□□ -2.31
RHOP08100 AC073869.9-201ENST00000641610 120 ntBASIC0.63□□□□□ -2.31
RHOP08100 RNU5F-1-201ENST00000362507 117 ntBASIC0.62□□□□□ -2.31
RHOP08100 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
RHOP08100 RNA5SP173-201ENST00000364857 136 ntBASIC0.62□□□□□ -2.31
RHOP08100 SNORA24B-201ENST00000384176 131 ntBASIC0.62□□□□□ -2.31
RHOP08100 SNORD90-201ENST00000391145 111 ntBASIC0.62□□□□□ -2.31
RHOP08100 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
RHOP08100 RNU6-557P-201ENST00000516842 110 ntBASIC0.62□□□□□ -2.31
RHOP08100 MIR4666B-201ENST00000578142 81 ntBASIC0.62□□□□□ -2.31
RHOP08100 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
RHOP08100 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
RHOP08100 RNA5SP457-201ENST00000363657 124 ntBASIC0.61□□□□□ -2.31
RHOP08100 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
RHOP08100 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
RHOP08100 RNU1-141P-201ENST00000364623 158 ntBASIC0.6□□□□□ -2.31
RHOP08100 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
RHOP08100 Y_RNA.660-201ENST00000516002 120 ntBASIC0.6□□□□□ -2.31
RHOP08100 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
RHOP08100 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
RHOP08100 SNORA25.18-201ENST00000607153 114 ntBASIC0.6□□□□□ -2.31
RHOP08100 Y_RNA.30-201ENST00000362572 97 ntBASIC0.59□□□□□ -2.31
RHOP08100 Y_RNA.219-201ENST00000364232 113 ntBASIC0.59□□□□□ -2.31
RHOP08100 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
RHOP08100 MIR3140-201ENST00000583685 90 ntBASIC0.59□□□□□ -2.31
RHOP08100 MIR548O2-201ENST00000616090 70 ntBASIC0.59□□□□□ -2.31
RHOP08100 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
RHOP08100 MIR3202-2-201ENST00000635980 79 ntBASIC0.59□□□□□ -2.31
RHOP08100 Y_RNA.115-201ENST00000363272 98 ntBASIC0.58□□□□□ -2.32
RHOP08100 Y_RNA.316-201ENST00000365118 111 ntBASIC0.58□□□□□ -2.32
RHOP08100 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
RHOP08100 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.58□□□□□ -2.32
RHOP08100 Y_RNA.264-201ENST00000364665 102 ntBASIC0.57□□□□□ -2.32
RHOP08100 RNU6-787P-201ENST00000384032 107 ntBASIC0.57□□□□□ -2.32
RHOP08100 MT-TY-201ENST00000387409 66 ntBASIC0.57□□□□□ -2.32
RHOP08100 RNU6-129P-201ENST00000391022 107 ntBASIC0.57□□□□□ -2.32
RHOP08100 SNORD77.2-201ENST00000391045 68 ntBASIC0.57□□□□□ -2.32
RHOP08100 RNA5SP484-201ENST00000458857 111 ntBASIC0.57□□□□□ -2.32
RHOP08100 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
RHOP08100 RNU1-29P-201ENST00000606574 126 ntBASIC0.57□□□□□ -2.32
RHOP08100 RNU6-315P-201ENST00000362666 107 ntBASIC0.56□□□□□ -2.32
RHOP08100 RNU6-573P-201ENST00000383938 106 ntBASIC0.56□□□□□ -2.32
RHOP08100 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
RHOP08100 RNU2-59P-201ENST00000410482 191 ntBASIC0.56□□□□□ -2.32
RHOP08100 RNU6-848P-201ENST00000515948 107 ntBASIC0.56□□□□□ -2.32
RHOP08100 RNU6-617P-201ENST00000516147 107 ntBASIC0.56□□□□□ -2.32
RHOP08100 RNU6-473P-201ENST00000516164 107 ntBASIC0.56□□□□□ -2.32
RHOP08100 RNU6-1049P-201ENST00000516414 107 ntBASIC0.56□□□□□ -2.32
RHOP08100 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
RHOP08100 MIR5706-201ENST00000579841 80 ntBASIC0.56□□□□□ -2.32
RHOP08100 AC069503.3-201ENST00000618674 145 ntBASIC0.56□□□□□ -2.32
RHOP08100 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
RHOP08100 RNU6-208P-201ENST00000362431 107 ntBASIC0.55□□□□□ -2.32
RHOP08100 RNU6-863P-201ENST00000515989 104 ntBASIC0.55□□□□□ -2.32
RHOP08100 MIR4460-201ENST00000577862 86 ntBASIC0.55□□□□□ -2.32
RHOP08100 MIR8087-201ENST00000612745 78 ntBASIC0.55□□□□□ -2.32
RHOP08100 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
RHOP08100 RNU6-478P-201ENST00000363904 110 ntBASIC0.54□□□□□ -2.32
RHOP08100 Y_RNA.437-201ENST00000384113 113 ntBASIC0.54□□□□□ -2.32
RHOP08100 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
RHOP08100 RNU6-1177P-201ENST00000391058 104 ntBASIC0.54□□□□□ -2.32
RHOP08100 AC069271.1-201ENST00000445577 156 ntBASIC0.54□□□□□ -2.32
RHOP08100 AL450471.1-201ENST00000447509 127 ntBASIC0.54□□□□□ -2.32
RHOP08100 snoU13.17-201ENST00000458802 104 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms