Protein–RNA interactions for Protein: O43617

TRAPPC3, Trafficking protein particle complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3O43617 MIR3140-201ENST00000583685 90 ntBASIC-1.04□□□□□ -2.58
TRAPPC3O43617 AC072026.1-201ENST00000605023 201 ntBASIC-1.04□□□□□ -2.58
TRAPPC3O43617 RNU6-797P-201ENST00000363101 109 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 RNU6-990P-201ENST00000364385 104 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 SNORA20.1-201ENST00000364790 130 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 SNORA63.6-201ENST00000364921 119 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 MIR577-201ENST00000385196 96 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 MT-TQ-201ENST00000387372 72 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 RNU6-816P-201ENST00000390914 107 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 AL158147.1-201ENST00000443970 75 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 AL117351.2-201ENST00000513571 157 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 YWHAEP3-201ENST00000582767 121 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 AC090617.8-201ENST00000623339 167 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 AP001340.1-201ENST00000624405 217 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 snoR1.1-201ENST00000628177 80 ntBASIC-1.05□□□□□ -2.58
TRAPPC3O43617 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.06□□□□□ -2.58
TRAPPC3O43617 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.06□□□□□ -2.58
TRAPPC3O43617 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.06□□□□□ -2.58
TRAPPC3O43617 MIR4464-201ENST00000580818 92 ntBASIC-1.06□□□□□ -2.58
TRAPPC3O43617 SNORA63.2-201ENST00000362603 126 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 RNY4P6-201ENST00000363667 96 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 RNU6-65P-201ENST00000516332 98 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 AL513043.2-201ENST00000573941 143 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 MIR3613-201ENST00000579844 87 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 MIR4499-201ENST00000584834 69 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 MIR382-201ENST00000637119 76 ntBASIC-1.07□□□□□ -2.58
TRAPPC3O43617 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.08□□□□□ -2.58
TRAPPC3O43617 RNU6-151P-201ENST00000364158 107 ntBASIC-1.08□□□□□ -2.58
TRAPPC3O43617 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.08□□□□□ -2.58
TRAPPC3O43617 MIR124-2-201ENST00000385081 109 ntBASIC-1.08□□□□□ -2.58
TRAPPC3O43617 SNORD18.2-201ENST00000459604 70 ntBASIC-1.08□□□□□ -2.58
TRAPPC3O43617 RNU6-682P-201ENST00000363843 106 ntBASIC-1.09□□□□□ -2.58
TRAPPC3O43617 SCARNA18B-201ENST00000458806 135 ntBASIC-1.09□□□□□ -2.58
TRAPPC3O43617 RNU7-24P-201ENST00000458867 62 ntBASIC-1.09□□□□□ -2.58
TRAPPC3O43617 RNU6-861P-201ENST00000516745 106 ntBASIC-1.09□□□□□ -2.58
TRAPPC3O43617 MIR548AX-201ENST00000580117 73 ntBASIC-1.09□□□□□ -2.58
TRAPPC3O43617 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.09□□□□□ -2.58
TRAPPC3O43617 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.1□□□□□ -2.59
TRAPPC3O43617 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.1□□□□□ -2.59
TRAPPC3O43617 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.1□□□□□ -2.59
TRAPPC3O43617 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
TRAPPC3O43617 SCARNA17-201ENST00000516183 144 ntBASIC-1.1□□□□□ -2.59
TRAPPC3O43617 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.1□□□□□ -2.59
TRAPPC3O43617 MIR3064-201ENST00000581130 66 ntBASIC-1.1□□□□□ -2.59
TRAPPC3O43617 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.1□□□□□ -2.59
TRAPPC3O43617 SNORA62.4-201ENST00000365504 151 ntBASIC-1.11□□□□□ -2.59
TRAPPC3O43617 SNORD90-201ENST00000391145 111 ntBASIC-1.11□□□□□ -2.59
TRAPPC3O43617 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.11□□□□□ -2.59
TRAPPC3O43617 uc_338.19-201ENST00000616808 99 ntBASIC-1.11□□□□□ -2.59
TRAPPC3O43617 RNU6-208P-201ENST00000362431 107 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 RNU6-832P-201ENST00000363319 107 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 SNORD114-17-201ENST00000364699 75 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 SNORD4B-201ENST00000459083 72 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 RNU6-138P-201ENST00000515952 107 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 MIR4694-201ENST00000578534 80 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 MIR6888-201ENST00000621977 67 ntBASIC-1.12□□□□□ -2.59
TRAPPC3O43617 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 SNORD75.2-201ENST00000408784 58 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 AC068339.1-201ENST00000526965 141 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 AC140658.3-201ENST00000567603 271 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 AC025166.1-201ENST00000612411 163 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 AL445584.3-201ENST00000617173 78 ntBASIC-1.13□□□□□ -2.59
TRAPPC3O43617 SNORD58C-201ENST00000365223 64 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 RNU6-394P-201ENST00000410735 107 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 RNU7-120P-201ENST00000459334 63 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 AC021146.9-201ENST00000512503 156 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 AC104996.3-201ENST00000590718 94 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.14□□□□□ -2.59
TRAPPC3O43617 AL353803.5-201ENST00000599815 141 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 U6.96-201ENST00000636425 70 ntBASIC-1.14□□□□□ -2.59
TRAPPC3O43617 MIR548A1-201ENST00000385041 97 ntBASIC-1.15□□□□□ -2.59
TRAPPC3O43617 MIR513C-201ENST00000401352 84 ntBASIC-1.15□□□□□ -2.59
TRAPPC3O43617 AL035470.1-201ENST00000622571 220 ntBASIC-1.15□□□□□ -2.59
TRAPPC3O43617 RNY3P2-201ENST00000362918 102 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 RNA5SP292-201ENST00000390974 118 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 RNU6-644P-201ENST00000391155 98 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 MIR1302-3-201ENST00000408128 138 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 MIR548X2-201ENST00000579776 100 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 AP001094.1-201ENST00000579805 193 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 MIR4503-201ENST00000582187 83 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 U7.2-201ENST00000607576 63 ntBASIC-1.16□□□□□ -2.6
TRAPPC3O43617 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms