Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 RNU2-51P-201ENST00000410708 197 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 AL513043.2-201ENST00000573941 143 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 MIR3064-201ENST00000581130 66 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 MIR6818-201ENST00000621576 65 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 SNORA33.1-201ENST00000364957 130 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 MIR29B1-201ENST00000385015 81 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 SNORD90-201ENST00000391145 111 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 SNORA26.4-201ENST00000391188 123 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 MIR8485-201ENST00000401372 91 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 MIR1255B2-201ENST00000408618 67 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 MIR548H3-201ENST00000408771 118 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 snoU13.17-201ENST00000458802 104 ntBASIC-1.54□□□□□ -2.66
SDCBPO00560 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.54□□□□□ -2.66
SDCBPO00560 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 RNU6-816P-201ENST00000390914 107 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 RNU7-197P-201ENST00000458836 62 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 AC130289.1-201ENST00000577321 73 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 MIR3165-201ENST00000579874 75 ntBASIC-1.55□□□□□ -2.66
SDCBPO00560 RNA5SP192-201ENST00000364404 120 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 SNORA33.2-201ENST00000365413 134 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 RNY3P14-201ENST00000384309 102 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 MIR577-201ENST00000385196 96 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 RNU6-460P-201ENST00000391158 108 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 RNA5SP136-201ENST00000410906 107 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 RNA5SP147-201ENST00000516493 109 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 RNU6-706P-201ENST00000517229 104 ntBASIC-1.56□□□□□ -2.66
SDCBPO00560 SNORD115-33-201ENST00000363723 82 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 SNORD115-22-201ENST00000364456 82 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 RNU6-915P-201ENST00000364943 103 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 RNU6-382P-201ENST00000365181 106 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 HAR1A.1-201ENST00000459583 118 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 AC022559.1-201ENST00000520905 205 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 MIR548S-201ENST00000581352 82 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 AC104996.3-201ENST00000590718 94 ntBASIC-1.57□□□□□ -2.66
SDCBPO00560 RNU6-924P-201ENST00000362926 108 ntBASIC-1.58□□□□□ -2.66
SDCBPO00560 RNU6-151P-201ENST00000364158 107 ntBASIC-1.58□□□□□ -2.66
SDCBPO00560 RNU6-260P-201ENST00000384092 107 ntBASIC-1.58□□□□□ -2.66
SDCBPO00560 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.58□□□□□ -2.66
SDCBPO00560 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.59□□□□□ -2.66
SDCBPO00560 MIR548U-201ENST00000390728 81 ntBASIC-1.59□□□□□ -2.66
SDCBPO00560 AC022028.1-201ENST00000412054 408 ntBASIC-1.59□□□□□ -2.66
SDCBPO00560 RNU6-781P-201ENST00000516377 101 ntBASIC-1.59□□□□□ -2.66
SDCBPO00560 CYP3A54P-201ENST00000566950 75 ntBASIC-1.59□□□□□ -2.66
SDCBPO00560 MIR3115-201ENST00000577915 68 ntBASIC-1.59□□□□□ -2.66
SDCBPO00560 RNA5SP26-201ENST00000362406 119 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 MIR203A-201ENST00000384836 110 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 MIR527-201ENST00000385244 85 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 RNA5SP292-201ENST00000390974 118 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 MIR3613-201ENST00000579844 87 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 AC141273.2-201ENST00000618989 130 ntBASIC-1.6□□□□□ -2.67
SDCBPO00560 RNU4-11P-201ENST00000365287 132 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 RNU6-639P-201ENST00000384074 107 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 RNU6-576P-201ENST00000390854 102 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 RNU4-61P-201ENST00000411243 107 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 SNORD4B-201ENST00000459083 72 ntBASIC-1.61□□□□□ -2.67
SDCBPO00560 MIR889-201ENST00000401280 79 ntBASIC-1.62□□□□□ -2.67
SDCBPO00560 MIR548F4-201ENST00000408515 105 ntBASIC-1.62□□□□□ -2.67
SDCBPO00560 AC138207.3-201ENST00000585289 166 ntBASIC-1.62□□□□□ -2.67
SDCBPO00560 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.62□□□□□ -2.67
SDCBPO00560 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 RNY4P6-201ENST00000363667 96 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 RNU6-824P-201ENST00000363724 104 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 AC026421.1-201ENST00000519101 163 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 MIR3657-201ENST00000584818 117 ntBASIC-1.63□□□□□ -2.67
SDCBPO00560 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.64□□□□□ -2.67
SDCBPO00560 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
SDCBPO00560 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.64□□□□□ -2.67
SDCBPO00560 RNU4-71P-201ENST00000516258 113 ntBASIC-1.64□□□□□ -2.67
SDCBPO00560 MIR4694-201ENST00000578534 80 ntBASIC-1.64□□□□□ -2.67
SDCBPO00560 AC006254.2-201ENST00000603259 279 ntBASIC-1.64□□□□□ -2.67
SDCBPO00560 MIR6509-201ENST00000614603 85 ntBASIC-1.64□□□□□ -2.67
SDCBPO00560 SNORA2.1-201ENST00000363089 137 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 RNU6-832P-201ENST00000363319 107 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 SNORD57-201ENST00000448188 72 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 RNU6-62P-201ENST00000516526 102 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.65□□□□□ -2.67
SDCBPO00560 MIR4773-1-201ENST00000637203 78 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms