Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SNORD114-28-201ENST00000363610 72 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 SNORD14C-201ENST00000365382 88 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 SNORD56B-201ENST00000384713 71 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 MIR4645-201ENST00000583158 77 ntBASIC-0.51□□□□□ -2.49
SLC28A1O00337 RNY1P5-201ENST00000383890 115 ntBASIC-0.52□□□□□ -2.49
SLC28A1O00337 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.52□□□□□ -2.49
SLC28A1O00337 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
SLC28A1O00337 MIR5009-201ENST00000578736 100 ntBASIC-0.52□□□□□ -2.49
SLC28A1O00337 MIR4432-201ENST00000581823 84 ntBASIC-0.52□□□□□ -2.49
SLC28A1O00337 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 MIR216B-201ENST00000390186 82 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 snoU13.13-201ENST00000458842 104 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 FGF7P7-201ENST00000514120 227 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 RNA5SP285-201ENST00000516619 119 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 RNA5SP66-201ENST00000517178 101 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 MIR4536-1-201ENST00000583537 88 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 AC103810.7-201ENST00000607821 91 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 MIR8064-201ENST00000612863 90 ntBASIC-0.53□□□□□ -2.49
SLC28A1O00337 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
SLC28A1O00337 RNU6-65P-201ENST00000516332 98 ntBASIC-0.54□□□□□ -2.5
SLC28A1O00337 RNU6-659P-201ENST00000516454 104 ntBASIC-0.54□□□□□ -2.5
SLC28A1O00337 MIR3140-201ENST00000583685 90 ntBASIC-0.54□□□□□ -2.5
SLC28A1O00337 SNORD115-25-201ENST00000362619 82 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 RNU6-900P-201ENST00000384498 102 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 RNU6-284P-201ENST00000411105 106 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 AL445193.1-201ENST00000441183 141 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 RNU6-795P-201ENST00000516323 103 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 RNU6-794P-201ENST00000517261 64 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 MIR4777-201ENST00000583710 86 ntBASIC-0.55□□□□□ -2.5
SLC28A1O00337 RNU6-80P-201ENST00000384195 107 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 SNORD90-201ENST00000391145 111 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 U3.27-201ENST00000391237 200 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
SLC28A1O00337 RNU7-55P-201ENST00000459426 62 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 MIR3064-201ENST00000581130 66 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 MIR4280-201ENST00000582178 76 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 AC012531.4-201ENST00000616509 177 ntBASIC-0.56□□□□□ -2.5
SLC28A1O00337 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 RNU6-813P-201ENST00000384691 107 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 RNU6-907P-201ENST00000390924 102 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 SNORA19.1-201ENST00000410656 129 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 MIR4439-201ENST00000583746 80 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 uc_338.36-201ENST00000622331 158 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 MIR6759-201ENST00000638110 65 ntBASIC-0.57□□□□□ -2.5
SLC28A1O00337 SNORD45B-201ENST00000364617 72 ntBASIC-0.58□□□□□ -2.5
SLC28A1O00337 SNORA24B-201ENST00000384176 131 ntBASIC-0.58□□□□□ -2.5
SLC28A1O00337 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.58□□□□□ -2.5
SLC28A1O00337 RNU6-476P-201ENST00000384726 107 ntBASIC-0.58□□□□□ -2.5
SLC28A1O00337 RNU6-644P-201ENST00000391155 98 ntBASIC-0.58□□□□□ -2.5
SLC28A1O00337 SNORD4B-201ENST00000459083 72 ntBASIC-0.58□□□□□ -2.5
SLC28A1O00337 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.59□□□□□ -2.5
SLC28A1O00337 MIR548A3-201ENST00000385297 97 ntBASIC-0.59□□□□□ -2.5
SLC28A1O00337 RNA5SP292-201ENST00000390974 118 ntBASIC-0.59□□□□□ -2.5
SLC28A1O00337 AC104996.3-201ENST00000590718 94 ntBASIC-0.59□□□□□ -2.5
SLC28A1O00337 MIR548AZ-201ENST00000616567 95 ntBASIC-0.59□□□□□ -2.5
SLC28A1O00337 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.59□□□□□ -2.5
SLC28A1O00337 AC093726.3-201ENST00000637588 150 ntBASIC-0.59□□□□□ -2.5
SLC28A1O00337 RNU6-502P-201ENST00000362419 108 ntBASIC-0.6□□□□□ -2.51
SLC28A1O00337 MIR7-2-201ENST00000384970 110 ntBASIC-0.6□□□□□ -2.51
SLC28A1O00337 SNORA63.2-201ENST00000362603 126 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 RNU6-901P-201ENST00000384593 106 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 SNORD38.3-201ENST00000516599 73 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 MIR5704-201ENST00000584029 77 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 MIR4436A-201ENST00000585278 85 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 U6.95-201ENST00000636931 70 ntBASIC-0.61□□□□□ -2.51
SLC28A1O00337 RNU6-495P-201ENST00000362995 107 ntBASIC-0.62□□□□□ -2.51
SLC28A1O00337 RNU6-990P-201ENST00000364385 104 ntBASIC-0.62□□□□□ -2.51
SLC28A1O00337 MIR548I1-201ENST00000408810 149 ntBASIC-0.62□□□□□ -2.51
SLC28A1O00337 MIR6851-201ENST00000617060 67 ntBASIC-0.62□□□□□ -2.51
SLC28A1O00337 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.63□□□□□ -2.51
SLC28A1O00337 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.63□□□□□ -2.51
SLC28A1O00337 SNORA40.17-201ENST00000517256 115 ntBASIC-0.63□□□□□ -2.51
SLC28A1O00337 AP001180.6-201ENST00000584918 159 ntBASIC-0.63□□□□□ -2.51
SLC28A1O00337 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.63□□□□□ -2.51
SLC28A1O00337 RNU6-774P-201ENST00000363238 107 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 SNORD114-4-201ENST00000363962 75 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 SNORD116-14-201ENST00000383894 92 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 SNORD116-17-201ENST00000383929 92 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 SNORD116-15-201ENST00000384445 92 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 SNORD116-19-201ENST00000384729 92 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 MIR548U-201ENST00000390728 81 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 MIR3133-201ENST00000583157 78 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 AL391099.1-201ENST00000624635 187 ntBASIC-0.64□□□□□ -2.51
SLC28A1O00337 RNU6-973P-201ENST00000364690 107 ntBASIC-0.65□□□□□ -2.51
SLC28A1O00337 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.65□□□□□ -2.51
SLC28A1O00337 RNU6-337P-201ENST00000391243 106 ntBASIC-0.65□□□□□ -2.51
SLC28A1O00337 SNORA3B-201ENST00000391305 131 ntBASIC-0.65□□□□□ -2.51
SLC28A1O00337 RNU6-519P-201ENST00000410590 108 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms