Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 MIR147A-201ENST00000385079 72 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 AL353813.1-201ENST00000440700 253 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.26□□□□□ -2.61
UPK1AO00322 AC072026.1-201ENST00000605023 201 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 RNU6-797P-201ENST00000363101 109 ntBASIC-1.27□□□□□ -2.61
UPK1AO00322 RNY4P6-201ENST00000363667 96 ntBASIC-1.27□□□□□ -2.61
UPK1AO00322 MIR606-201ENST00000384851 96 ntBASIC-1.27□□□□□ -2.61
UPK1AO00322 RNU6-460P-201ENST00000391158 108 ntBASIC-1.27□□□□□ -2.61
UPK1AO00322 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.27□□□□□ -2.61
UPK1AO00322 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 RNU6-905P-201ENST00000384434 107 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 MIRLET7B-201ENST00000385140 83 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 RNU6-592P-201ENST00000411333 103 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 RNU6-75P-201ENST00000515944 104 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 RNA5SP461-201ENST00000516451 104 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.28□□□□□ -2.61
UPK1AO00322 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 RNU6-816P-201ENST00000390914 107 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 MIR513C-201ENST00000401352 84 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 AC062037.2-201ENST00000610137 73 ntBASIC-1.29□□□□□ -2.62
UPK1AO00322 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.3□□□□□ -2.62
UPK1AO00322 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.3□□□□□ -2.62
UPK1AO00322 MIR8485-201ENST00000401372 91 ntBASIC-1.3□□□□□ -2.62
UPK1AO00322 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.3□□□□□ -2.62
UPK1AO00322 SNORA62.4-201ENST00000365504 151 ntBASIC-1.31□□□□□ -2.62
UPK1AO00322 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.31□□□□□ -2.62
UPK1AO00322 RNU7-197P-201ENST00000458836 62 ntBASIC-1.31□□□□□ -2.62
UPK1AO00322 AL117351.2-201ENST00000513571 157 ntBASIC-1.31□□□□□ -2.62
UPK1AO00322 AC025521.1-201ENST00000621624 286 ntBASIC-1.31□□□□□ -2.62
UPK1AO00322 MIR6086-201ENST00000638065 55 ntBASIC-1.31□□□□□ -2.62
UPK1AO00322 RNU6-151P-201ENST00000364158 107 ntBASIC-1.32□□□□□ -2.62
UPK1AO00322 SNORD115-23-201ENST00000364461 82 ntBASIC-1.32□□□□□ -2.62
UPK1AO00322 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.32□□□□□ -2.62
UPK1AO00322 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.32□□□□□ -2.62
UPK1AO00322 HLA-S-202ENST00000425174 53 ntBASIC-1.32□□□□□ -2.62
UPK1AO00322 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.32□□□□□ -2.62
UPK1AO00322 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 MIR124-2-201ENST00000385081 109 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 MIR548U-201ENST00000390728 81 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 MTCYBP9-201ENST00000431021 303 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 U6.96-201ENST00000636425 70 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 MIR4320-201ENST00000636981 65 ntBASIC-1.33□□□□□ -2.62
UPK1AO00322 SNORA63.2-201ENST00000362603 126 ntBASIC-1.34□□□□□ -2.62
UPK1AO00322 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.34□□□□□ -2.62
UPK1AO00322 SNORD50.2-201ENST00000365465 70 ntBASIC-1.34□□□□□ -2.62
UPK1AO00322 RNU6-337P-201ENST00000391243 106 ntBASIC-1.34□□□□□ -2.62
UPK1AO00322 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
UPK1AO00322 AC021146.9-201ENST00000512503 156 ntBASIC-1.34□□□□□ -2.62
UPK1AO00322 snoU83B.1-201ENST00000517136 88 ntBASIC-1.34□□□□□ -2.62
UPK1AO00322 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.35□□□□□ -2.63
UPK1AO00322 AP001094.1-201ENST00000579805 193 ntBASIC-1.35□□□□□ -2.63
UPK1AO00322 RNU6-495P-201ENST00000362995 107 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 RNU6-226P-201ENST00000363778 107 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 RNU7-134P-201ENST00000458997 64 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 RNU6-781P-201ENST00000516377 101 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 AC141273.2-201ENST00000618989 130 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.36□□□□□ -2.63
UPK1AO00322 SNORA63-201ENST00000363450 132 ntBASIC-1.37□□□□□ -2.63
UPK1AO00322 SNORD114-17-201ENST00000364699 75 ntBASIC-1.37□□□□□ -2.63
UPK1AO00322 AL158147.1-201ENST00000443970 75 ntBASIC-1.37□□□□□ -2.63
UPK1AO00322 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.37□□□□□ -2.63
UPK1AO00322 YWHAEP3-201ENST00000582767 121 ntBASIC-1.37□□□□□ -2.63
UPK1AO00322 AP001340.1-201ENST00000624405 217 ntBASIC-1.37□□□□□ -2.63
UPK1AO00322 RNU6-208P-201ENST00000362431 107 ntBASIC-1.38□□□□□ -2.63
UPK1AO00322 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.38□□□□□ -2.63
UPK1AO00322 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.38□□□□□ -2.63
UPK1AO00322 AC026421.1-201ENST00000519101 163 ntBASIC-1.38□□□□□ -2.63
UPK1AO00322 AL513043.2-201ENST00000573941 143 ntBASIC-1.38□□□□□ -2.63
UPK1AO00322 MIR6129-201ENST00000616087 109 ntBASIC-1.38□□□□□ -2.63
UPK1AO00322 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 RNU6-738P-201ENST00000384531 106 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 MIR577-201ENST00000385196 96 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 RNU7-85P-201ENST00000458851 63 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 MIR5591-201ENST00000578248 65 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 MIR4694-201ENST00000578534 80 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 MIR3140-201ENST00000583685 90 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 AC138207.3-201ENST00000585289 166 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 AC025166.1-201ENST00000612411 163 ntBASIC-1.39□□□□□ -2.63
UPK1AO00322 RNU6-990P-201ENST00000364385 104 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 RNU6-132P-201ENST00000383863 107 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 RNU6-861P-201ENST00000516745 106 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 AC068339.1-201ENST00000526965 141 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 U7.2-201ENST00000607576 63 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.4□□□□□ -2.63
UPK1AO00322 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms