Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
H3BM21 SNORA9.1-201ENST00000362412 131 ntBASIC1.92□□□□□ -2.1
H3BM21 RNU6-1246P-201ENST00000391064 107 ntBASIC1.92□□□□□ -2.1
H3BM21 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
H3BM21 MIR7110-201ENST00000612638 86 ntBASIC1.92□□□□□ -2.1
H3BM21 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.92□□□□□ -2.1
H3BM21 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
H3BM21 RNU6-994P-201ENST00000410507 111 ntBASIC1.91□□□□□ -2.1
H3BM21 SNORA31.2-201ENST00000516019 134 ntBASIC1.91□□□□□ -2.1
H3BM21 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.91□□□□□ -2.1
H3BM21 RNU6-165P-201ENST00000517170 99 ntBASIC1.91□□□□□ -2.1
H3BM21 MIR4781-201ENST00000585250 76 ntBASIC1.91□□□□□ -2.1
H3BM21 AL359821.1-201ENST00000605519 182 ntBASIC1.91□□□□□ -2.1
H3BM21 SNORA40B-201ENST00000385573 128 ntBASIC1.9□□□□□ -2.11
H3BM21 RNU6-724P-201ENST00000390958 105 ntBASIC1.9□□□□□ -2.11
H3BM21 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
H3BM21 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
H3BM21 AL136317.1-201ENST00000612653 226 ntBASIC1.9□□□□□ -2.11
H3BM21 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
H3BM21 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
H3BM21 SNORD116-16-201ENST00000384533 92 ntBASIC1.89□□□□□ -2.11
H3BM21 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H3BM21 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H3BM21 RNU6-1250P-201ENST00000391218 107 ntBASIC1.89□□□□□ -2.11
H3BM21 Y_RNA.633-201ENST00000459107 95 ntBASIC1.89□□□□□ -2.11
H3BM21 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
H3BM21 Y_RNA.224-201ENST00000364308 111 ntBASIC1.88□□□□□ -2.11
H3BM21 SNORD41.1-201ENST00000391000 69 ntBASIC1.88□□□□□ -2.11
H3BM21 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.88□□□□□ -2.11
H3BM21 AC048334.1-201ENST00000477975 159 ntBASIC1.88□□□□□ -2.11
H3BM21 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.88□□□□□ -2.11
H3BM21 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
H3BM21 SNORA25.8-201ENST00000364831 128 ntBASIC1.87□□□□□ -2.11
H3BM21 MIR100-201ENST00000385259 80 ntBASIC1.87□□□□□ -2.11
H3BM21 AC108667.1-201ENST00000428618 249 ntBASIC1.87□□□□□ -2.11
H3BM21 RNU5B-6P-201ENST00000516765 68 ntBASIC1.87□□□□□ -2.11
H3BM21 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
H3BM21 RNU6-810P-201ENST00000364001 107 ntBASIC1.86□□□□□ -2.11
H3BM21 RNU1-141P-201ENST00000364623 158 ntBASIC1.86□□□□□ -2.11
H3BM21 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
H3BM21 MIR302D-201ENST00000362275 68 ntBASIC1.85□□□□□ -2.11
H3BM21 RNU6-247P-201ENST00000362636 107 ntBASIC1.85□□□□□ -2.11
H3BM21 MIR520F-201ENST00000384824 87 ntBASIC1.85□□□□□ -2.11
H3BM21 MIR758-201ENST00000390227 88 ntBASIC1.85□□□□□ -2.11
H3BM21 MIR548L-201ENST00000408303 86 ntBASIC1.85□□□□□ -2.11
H3BM21 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
H3BM21 SNORA7.1-201ENST00000363750 139 ntBASIC1.84□□□□□ -2.11
H3BM21 SNORA63.6-201ENST00000364921 119 ntBASIC1.84□□□□□ -2.11
H3BM21 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
H3BM21 MIR30A-201ENST00000385092 71 ntBASIC1.84□□□□□ -2.11
H3BM21 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
H3BM21 snoU13.31-201ENST00000607291 104 ntBASIC1.84□□□□□ -2.11
H3BM21 SNORD1A-201ENST00000364968 72 ntBASIC1.83□□□□□ -2.12
H3BM21 MIR644A-201ENST00000385262 94 ntBASIC1.83□□□□□ -2.12
H3BM21 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
H3BM21 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
H3BM21 AC244669.1-204ENST00000621564 178 ntBASIC1.83□□□□□ -2.12
H3BM21 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
H3BM21 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
H3BM21 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
H3BM21 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
H3BM21 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
H3BM21 Y_RNA.74-201ENST00000362911 99 ntBASIC1.82□□□□□ -2.12
H3BM21 Y_RNA.118-201ENST00000363300 101 ntBASIC1.82□□□□□ -2.12
H3BM21 Y_RNA.363-201ENST00000365529 113 ntBASIC1.82□□□□□ -2.12
H3BM21 SNORD28-201ENST00000384706 75 ntBASIC1.82□□□□□ -2.12
H3BM21 SNORA17.3-201ENST00000391159 129 ntBASIC1.82□□□□□ -2.12
H3BM21 snoU13.9-201ENST00000458927 103 ntBASIC1.82□□□□□ -2.12
H3BM21 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
H3BM21 MIR1-1-201ENST00000362147 71 ntBASIC1.81□□□□□ -2.12
H3BM21 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
H3BM21 AL591704.2-201ENST00000421658 181 ntBASIC1.81□□□□□ -2.12
H3BM21 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
H3BM21 RNU6-135P-201ENST00000516769 101 ntBASIC1.81□□□□□ -2.12
H3BM21 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
H3BM21 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
H3BM21 MIR4639-201ENST00000584938 69 ntBASIC1.81□□□□□ -2.12
H3BM21 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
H3BM21 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
H3BM21 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
H3BM21 Y_RNA.282-201ENST00000364793 102 ntBASIC1.8□□□□□ -2.12
H3BM21 MIR517C-201ENST00000385103 95 ntBASIC1.8□□□□□ -2.12
H3BM21 MIR527-201ENST00000385244 85 ntBASIC1.8□□□□□ -2.12
H3BM21 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
H3BM21 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
H3BM21 AL021921.1-201ENST00000442774 93 ntBASIC1.8□□□□□ -2.12
H3BM21 RNU7-21P-201ENST00000459430 62 ntBASIC1.8□□□□□ -2.12
H3BM21 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
H3BM21 SNORD33-201ENST00000362761 85 ntBASIC1.79□□□□□ -2.12
H3BM21 RNU6-172P-201ENST00000411000 93 ntBASIC1.79□□□□□ -2.12
H3BM21 CYP3A54P-201ENST00000566950 75 ntBASIC1.79□□□□□ -2.12
H3BM21 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
H3BM21 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
H3BM21 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
H3BM21 RNU6-726P-201ENST00000364680 107 ntBASIC1.78□□□□□ -2.12
H3BM21 RNA5SP190-201ENST00000365222 118 ntBASIC1.78□□□□□ -2.12
H3BM21 Y_RNA.355-201ENST00000365462 98 ntBASIC1.78□□□□□ -2.12
H3BM21 MIR582-201ENST00000365731 98 ntBASIC1.78□□□□□ -2.12
H3BM21 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
H3BM21 RNU6-321P-201ENST00000410912 106 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms