Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AL162376.1-201ENST00000624117 175 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 AC067863.3-201ENST00000624172 122 ntBASIC0.59□□□□□ -2.31
IGKV3D-20A0A0C4DH25 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU5F-1-201ENST00000362507 117 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNA5SP99-201ENST00000364020 114 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6V-201ENST00000384105 107 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR146A-201ENST00000385201 99 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNA5SP484-201ENST00000458857 111 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-70P-201ENST00000516438 60 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR4752-201ENST00000579672 72 ntBASIC0.58□□□□□ -2.32
IGKV3D-20A0A0C4DH25 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 Y_RNA.264-201ENST00000364665 102 ntBASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORA8.1-201ENST00000384250 140 ntBASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-540P-201ENST00000384622 101 ntBASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU2-59P-201ENST00000410482 191 ntBASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-1057P-201ENST00000517162 102 ntBASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR6857-201ENST00000613267 93 ntBASIC0.57□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-990P-201ENST00000364385 104 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORD115-22-201ENST00000364456 82 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU1-141P-201ENST00000364623 158 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORA25.9-201ENST00000365087 128 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 Y_RNA.327-201ENST00000365201 102 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-1241P-201ENST00000384536 107 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 Y_RNA.545-201ENST00000384652 105 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 ACA64.5-201ENST00000516207 127 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR3973-201ENST00000579824 107 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR548AE1-201ENST00000583292 70 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 AL078603.1-201ENST00000603824 313 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORA70.25-201ENST00000612741 95 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR4773-1-201ENST00000637203 78 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR6866-201ENST00000638146 69 ntBASIC0.56□□□□□ -2.32
IGKV3D-20A0A0C4DH25 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 Y_RNA.386-201ENST00000383913 105 ntBASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MT-TY-201ENST00000387409 66 ntBASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 U3.27-201ENST00000391237 200 ntBASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORD75.2-201ENST00000408784 58 ntBASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU5B-6P-201ENST00000516765 68 ntBASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 AC025627.3-201ENST00000582078 182 ntBASIC0.55□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-411P-201ENST00000384451 107 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORD45A-201ENST00000384512 84 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR203A-201ENST00000384836 110 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-482P-201ENST00000391068 107 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-587P-201ENST00000391282 106 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNA5SP222-201ENST00000411039 105 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU7-24P-201ENST00000458867 62 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNA5SP268-201ENST00000516828 124 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR1297-201ENST00000637311 77 ntBASIC0.54□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORD114-27-201ENST00000363766 70 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNY4P3-201ENST00000365254 95 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORD116-24-201ENST00000384549 92 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR23A-201ENST00000385245 73 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-634P-201ENST00000459134 106 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 PSMC1P5-201ENST00000512850 177 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-982P-201ENST00000516216 102 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU6-469P-201ENST00000516253 101 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 AL109933.3-201ENST00000619095 188 ntBASIC0.53□□□□□ -2.32
IGKV3D-20A0A0C4DH25 MIR582-201ENST00000365731 98 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-1039P-201ENST00000383931 107 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 SNORA8.2-201ENST00000384372 139 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR608-201ENST00000384820 100 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-604P-201ENST00000390917 100 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AC069271.1-201ENST00000445577 156 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-135P-201ENST00000516769 101 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-807P-201ENST00000516805 107 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR3675-201ENST00000583661 73 ntBASIC0.52□□□□□ -2.33
IGKV3D-20A0A0C4DH25 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
IGKV3D-20A0A0C4DH25 HMGN2P22-201ENST00000427588 175 ntBASIC0.51□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AC114801.3-201ENST00000510231 177 ntBASIC0.51□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR3657-201ENST00000584818 117 ntBASIC0.51□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR6755-201ENST00000619993 66 ntBASIC0.51□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR373-201ENST00000362273 69 ntBASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 SNORD45.1-201ENST00000363181 77 ntBASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-392P-201ENST00000364926 101 ntBASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNA5SP227-201ENST00000516184 113 ntBASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 Y_RNA.681-201ENST00000516445 113 ntBASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR4460-201ENST00000577862 86 ntBASIC0.5□□□□□ -2.33
IGKV3D-20A0A0C4DH25 SNORA36.2-201ENST00000384004 127 ntBASIC0.49□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR548L-201ENST00000408303 86 ntBASIC0.49□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.49□□□□□ -2.33
IGKV3D-20A0A0C4DH25 SNORD113.1-201ENST00000363280 73 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 SNORD118-201ENST00000363593 134 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR652-201ENST00000385278 98 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR1265-201ENST00000408444 86 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AC073261.1-201ENST00000429409 121 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-881P-201ENST00000516813 102 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR4473-201ENST00000583731 91 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms