Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.27□□□□□ -2.61
TRAV41A0A0B4J266 AC141273.2-201ENST00000618989 130 ntBASIC-1.27□□□□□ -2.61
TRAV41A0A0B4J266 RNU4-11P-201ENST00000365287 132 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 RNU6-816P-201ENST00000390914 107 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 RNA5SP470-201ENST00000516463 106 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 AL353803.5-201ENST00000599815 141 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 MIR6888-201ENST00000621977 67 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 U6.96-201ENST00000636425 70 ntBASIC-1.28□□□□□ -2.61
TRAV41A0A0B4J266 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 RNU6-781P-201ENST00000516377 101 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 RNU6-111P-201ENST00000517179 105 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 AL513043.2-201ENST00000573941 143 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 MIR3128-201ENST00000581957 66 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 AL445584.3-201ENST00000617173 78 ntBASIC-1.29□□□□□ -2.62
TRAV41A0A0B4J266 MIR409-201ENST00000362237 79 ntBASIC-1.3□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.3□□□□□ -2.62
TRAV41A0A0B4J266 RNY1P9-201ENST00000532431 109 ntBASIC-1.3□□□□□ -2.62
TRAV41A0A0B4J266 MIR3064-201ENST00000581130 66 ntBASIC-1.3□□□□□ -2.62
TRAV41A0A0B4J266 MIR6738-201ENST00000619620 64 ntBASIC-1.3□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 MIR577-201ENST00000385196 96 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 SNORD75.2-201ENST00000408784 58 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 RNU7-24P-201ENST00000458867 62 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 AC068339.1-201ENST00000526965 141 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 AL117187.1-201ENST00000555482 181 ntBASIC-1.31□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.32□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.32□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.32□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.32□□□□□ -2.62
TRAV41A0A0B4J266 MIR587-201ENST00000384845 96 ntBASIC-1.33□□□□□ -2.62
TRAV41A0A0B4J266 MIR548A1-201ENST00000385041 97 ntBASIC-1.33□□□□□ -2.62
TRAV41A0A0B4J266 SNORA81.3-201ENST00000517283 198 ntBASIC-1.33□□□□□ -2.62
TRAV41A0A0B4J266 MIR4324-201ENST00000584846 72 ntBASIC-1.33□□□□□ -2.62
TRAV41A0A0B4J266 AC104996.3-201ENST00000590718 94 ntBASIC-1.33□□□□□ -2.62
TRAV41A0A0B4J266 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.34□□□□□ -2.62
TRAV41A0A0B4J266 RNY4P6-201ENST00000363667 96 ntBASIC-1.34□□□□□ -2.62
TRAV41A0A0B4J266 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.34□□□□□ -2.62
TRAV41A0A0B4J266 MIR548U-201ENST00000390728 81 ntBASIC-1.34□□□□□ -2.62
TRAV41A0A0B4J266 SNORD90-201ENST00000391145 111 ntBASIC-1.34□□□□□ -2.62
TRAV41A0A0B4J266 snoU13.17-201ENST00000458802 104 ntBASIC-1.35□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.35□□□□□ -2.63
TRAV41A0A0B4J266 AC044792.1-201ENST00000593294 196 ntBASIC-1.35□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 SNORA33.1-201ENST00000364957 130 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-746P-201ENST00000384112 109 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 AL158147.1-201ENST00000443970 75 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 MIR4694-201ENST00000578534 80 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 MIR3613-201ENST00000579844 87 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 MIR4306-201ENST00000583390 91 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 AC072026.1-201ENST00000605023 201 ntBASIC-1.36□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-832P-201ENST00000363319 107 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-151P-201ENST00000364158 107 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-382P-201ENST00000365181 106 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 RNA5SP292-201ENST00000390974 118 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 RNU7-134P-201ENST00000458997 64 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 SNORD4B-201ENST00000459083 72 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.37□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-10P-201ENST00000384036 107 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-24P-201ENST00000384440 107 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 MIR1255B2-201ENST00000408618 67 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 RNA5SP147-201ENST00000516493 109 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 AP001340.1-201ENST00000624405 217 ntBASIC-1.38□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-260P-201ENST00000384092 107 ntBASIC-1.39□□□□□ -2.63
TRAV41A0A0B4J266 SNORD63.1-201ENST00000516178 80 ntBASIC-1.39□□□□□ -2.63
TRAV41A0A0B4J266 RNU6-479P-201ENST00000516348 105 ntBASIC-1.39□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.39□□□□□ -2.63
TRAV41A0A0B4J266 AC132825.6-201ENST00000638861 357 ntBASIC-1.39□□□□□ -2.63
TRAV41A0A0B4J266 RNY3P2-201ENST00000362918 102 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 SNORA20.1-201ENST00000364790 130 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 AC008737.2-201ENST00000599446 118 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 AC103810.7-201ENST00000607821 91 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 AC025166.1-201ENST00000612411 163 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 AL035470.1-201ENST00000622571 220 ntBASIC-1.4□□□□□ -2.63
TRAV41A0A0B4J266 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.41□□□□□ -2.64
TRAV41A0A0B4J266 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.41□□□□□ -2.64
TRAV41A0A0B4J266 MIR203A-201ENST00000384836 110 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 353.3 ms